RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SLC22A11Q9NSA0 550 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 FAM86C1Q9NVL1 165 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 FLRT3Q9NZU0 649 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 A0A1B0GX78 115 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 ABOP16442 354 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 FOLR3P41439 243 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 MRPS34P82930 218 aaKnown RBP10.89□□□□□ -0.67
ERBB2-206ENST00000578373 TAGLNQ01995 201 aaKnown RBP10.89□□□□□ -0.67
ERBB2-206ENST00000578373 MLC1Q15049 377 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 MANEAQ5SRI9 462 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 MKXQ8IYA7 352 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 OR1M1Q8NGA1 313 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 SNIP1Q8TAD8 396 aaKnown RBP10.89□□□□□ -0.67
ERBB2-206ENST00000578373 FRZBQ92765 325 aa10.89□□□□□ -0.67
ERBB2-206ENST00000578373 A0A1W2PPV9 198 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 TCRBV16S1A1N1A0A5B0 115 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 NME2P1O60361 137 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 TK1P04183 234 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 SLC6A1P30531 599 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 RFC3P40938 356 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 IKZF1Q13422 519 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ZNF74Q16587 644 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 LYSMD4Q5XG99 296 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 LINC00696Q6ZRV3 163 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MUC20Q8N307 709 aaPredicted RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MMP25Q9NPA2 562 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 DNAJB12Q9NXW2 375 aaKnown RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 PURGQ9UJV8 347 aaKnown RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 POMT2Q9UKY4 750 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MMP17Q9ULZ9 603 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ABCA7Q8IZY2 2146 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 LY75O60449 1722 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 A6NCN8 305 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 GJE1A6NN92 205 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 VSTM5A8MXK1 200 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ZNF354AO60765 605 aaPredicted RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 TAS2R46P59540 309 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ZNF85Q03923 595 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ETFBKMTQ8IXQ9 262 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 NUDT9Q9BW91 350 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 CALHM2Q9HA72 323 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 HS3ST3A1Q9Y663 406 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 QSER1Q2KHR3 1735 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MED19A0JLT2 244 aaPredicted RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 XRCC2O43543 280 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ANGPTL7O43827 346 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ALOX12BO75342 701 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 NKX2-2O95096 273 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 RD3LP0DJH9 198 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 GABRG2P18507 467 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ATP1B3P54709 279 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ESPL1Q14674 2120 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MRM1Q6IN84 353 aaKnown RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 OPN5Q6U736 354 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 TMEM52Q8NDY8 209 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ELSPBP1Q96BH3 223 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MRPL38Q96DV4 380 aaKnown RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 COX14Q96I36 57 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 KCNIP1Q9NZI2 227 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 FBXO7Q9Y3I1 522 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MMACHCQ9Y4U1 282 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 TRAV1-2A0A0B4J238 106 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 SERTM1A2A2V5 107 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 CD300LBA8K4G0 201 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MRPL33O75394 65 aaKnown RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 MOSPD3O75425 235 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 SPINK2P20155 84 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 CPT2P23786 658 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 PDZK1IP1Q13113 114 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 TOMM34Q15785 309 aaPredicted RBP10.88□□□□□ -0.67
ERBB2-206ENST00000578373 RFLNBQ8N5W9 214 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 C14orf79Q96F83 325 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 WNK3Q9BYP7 1800 aa10.88□□□□□ -0.67
ERBB2-206ENST00000578373 ARPC4-TTLL3A0A0A6YYG9 625 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 SLC34A2O95436 690 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 CBX7O95931 251 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 MT-ATP6P00846 226 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 CD53P19397 219 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 CAPZBP47756 277 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 S100A12P80511 92 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 PRICKLE4Q2TBC4 344 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 SIGIRRQ6IA17 410 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 OR52N5Q8NH56 324 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 CCNL2Q96S94 520 aaPredicted RBP10.87□□□□□ -0.67
ERBB2-206ENST00000578373 SPIN2AQ99865 258 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 SPIN2BQ9BPZ2 258 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 FKRPQ9H9S5 495 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 CDH20Q9HBT6 801 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 IGHV5-51A0A0C4DH38 117 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 METTL12A8MUP2 240 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 FTCDNL1E5RQL4 147 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 OR2J2O76002 312 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 RRASP10301 218 aa10.87□□□□□ -0.67
ERBB2-206ENST00000578373 TBXA2RP21731 343 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms