RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 SCAMP2O15127 329 aaKnown RBP2.58□□□□□ -2
CDC27-219ENST00000576484 NVLO15381 856 aaKnown RBP2.58□□□□□ -2
CDC27-219ENST00000576484 CLDN11O75508 207 aa2.58□□□□□ -2
CDC27-219ENST00000576484 H6PDO95479 791 aa2.58□□□□□ -2
CDC27-219ENST00000576484 ARG1P05089 322 aa2.58□□□□□ -2
CDC27-219ENST00000576484 CTSLP07711 333 aa2.58□□□□□ -2
CDC27-219ENST00000576484 DUX4L2P0CJ85 424 aa2.58□□□□□ -2
CDC27-219ENST00000576484 DUX4L3P0CJ86 424 aa2.58□□□□□ -2
CDC27-219ENST00000576484 DUX4L5P0CJ88 424 aa2.58□□□□□ -2
CDC27-219ENST00000576484 DUX4L6P0CJ89 424 aa2.58□□□□□ -2
CDC27-219ENST00000576484 DUX4L7P0CJ90 424 aa2.58□□□□□ -2
CDC27-219ENST00000576484 CT45A6P0DMU7 189 aa2.58□□□□□ -2
CDC27-219ENST00000576484 CT45A5P0DMU8 189 aa2.58□□□□□ -2
CDC27-219ENST00000576484 CT45A7P0DMV0 189 aa2.58□□□□□ -2
CDC27-219ENST00000576484 ERGP11308 486 aa2.58□□□□□ -2
CDC27-219ENST00000576484 ATF6P18850 670 aa2.58□□□□□ -2
CDC27-219ENST00000576484 U2AF2P26368 475 aaKnown RBP eCLIP2.58□□□□□ -25e-7■□□□□ 8.9
CDC27-219ENST00000576484 CDKN2DP55273 166 aa2.58□□□□□ -2
CDC27-219ENST00000576484 VSX2P58304 361 aaPredicted RBP2.58□□□□□ -2
CDC27-219ENST00000576484 EIF3EP60228 445 aaKnown RBP2.58□□□□□ -2
CDC27-219ENST00000576484 HMGN5P82970 282 aaKnown RBP2.58□□□□□ -2
CDC27-219ENST00000576484 CT45A1Q5HYN5 189 aa2.58□□□□□ -2
CDC27-219ENST00000576484 ARMC12Q5T9G4 340 aa2.58□□□□□ -2
CDC27-219ENST00000576484 RAET1LQ5VY80 246 aa2.58□□□□□ -2
CDC27-219ENST00000576484 C22orf42Q6IC83 251 aa2.58□□□□□ -2
CDC27-219ENST00000576484 SNX20Q7Z614 316 aa2.58□□□□□ -2
CDC27-219ENST00000576484 COX18Q8N8Q8 333 aa2.58□□□□□ -2
CDC27-219ENST00000576484 CT45A3Q8NHU0 189 aa2.58□□□□□ -2
CDC27-219ENST00000576484 SLC38A4Q969I6 547 aa2.58□□□□□ -2
CDC27-219ENST00000576484 CCDC59Q9P031 241 aaKnown RBP2.58□□□□□ -2
CDC27-219ENST00000576484 DUX4Q9UBX2 424 aa2.58□□□□□ -2
CDC27-219ENST00000576484 MTFP1Q9UDX5 166 aa2.58□□□□□ -2
CDC27-219ENST00000576484 SIGLEC9Q9Y336 463 aa2.58□□□□□ -2
CDC27-219ENST00000576484 DOCK8Q8NF50 2099 aa2.57□□□□□ -2
CDC27-219ENST00000576484 TRBV9A0A0B4J1U6 114 aa2.57□□□□□ -2
CDC27-219ENST00000576484 TRBV11-1A0A0K0K1C0 115 aa2.57□□□□□ -2
CDC27-219ENST00000576484 NCBP2LA6PVI3 153 aaKnown RBP2.57□□□□□ -2
CDC27-219ENST00000576484 EIF4E2O60573 245 aaKnown RBP2.57□□□□□ -2
CDC27-219ENST00000576484 REM1O75628 298 aa2.57□□□□□ -2
CDC27-219ENST00000576484 FTH1P02794 183 aa2.57□□□□□ -2
CDC27-219ENST00000576484 SYNJ2BPP57105 145 aa2.57□□□□□ -2
CDC27-219ENST00000576484 CDK5Q00535 292 aa2.57□□□□□ -2
CDC27-219ENST00000576484 TGM3Q08188 693 aa2.57□□□□□ -2
CDC27-219ENST00000576484 SRSF5Q13243 272 aaKnown RBP2.57□□□□□ -2
CDC27-219ENST00000576484 ALKBH6Q3KRA9 238 aa2.57□□□□□ -2
CDC27-219ENST00000576484 LRRC66Q68CR7 880 aa2.57□□□□□ -2
CDC27-219ENST00000576484 C11orf72Q8NBR9 251 aa2.57□□□□□ -2
CDC27-219ENST00000576484 CHST4Q8NCG5 386 aa2.57□□□□□ -2
CDC27-219ENST00000576484 LILRB4Q8NHJ6 448 aa2.57□□□□□ -2
CDC27-219ENST00000576484 C17orf50Q8WW18 174 aa2.57□□□□□ -2
CDC27-219ENST00000576484 ECHDC3Q96DC8 303 aa2.57□□□□□ -2
CDC27-219ENST00000576484 HSD17B10Q99714 261 aaKnown RBP2.57□□□□□ -2
CDC27-219ENST00000576484 CCDC77Q9BR77 488 aa2.57□□□□□ -2
CDC27-219ENST00000576484 ANKRD60Q9BZ19 345 aa2.57□□□□□ -2
CDC27-219ENST00000576484 FGF23Q9GZV9 251 aaPredicted RBP2.57□□□□□ -2
CDC27-219ENST00000576484 MTCH1Q9NZJ7 389 aa2.57□□□□□ -2
CDC27-219ENST00000576484 NDUFAB1O14561 156 aa2.56□□□□□ -2
CDC27-219ENST00000576484 LSM1O15116 133 aaKnown RBP2.56□□□□□ -2
CDC27-219ENST00000576484 RAD51CO43502 376 aa2.56□□□□□ -2
CDC27-219ENST00000576484 WBP4O75554 376 aaKnown RBP2.56□□□□□ -2
CDC27-219ENST00000576484 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CDC27-219ENST00000576484 FLOT1O75955 427 aa2.56□□□□□ -2
CDC27-219ENST00000576484 CDRT1O95170 752 aa2.56□□□□□ -2
CDC27-219ENST00000576484 CD74P04233 296 aa2.56□□□□□ -2
CDC27-219ENST00000576484 IL4P05112 153 aa2.56□□□□□ -2
CDC27-219ENST00000576484 CCNA1P78396 465 aa2.56□□□□□ -2
CDC27-219ENST00000576484 IFT88Q13099 833 aa2.56□□□□□ -2
CDC27-219ENST00000576484 PIGHQ14442 188 aaPredicted RBP2.56□□□□□ -2
CDC27-219ENST00000576484 MPV17L2Q567V2 206 aa2.56□□□□□ -2
CDC27-219ENST00000576484 KPRPQ5T749 579 aaPredicted RBP2.56□□□□□ -2
CDC27-219ENST00000576484 PRR9Q5T870 116 aa2.56□□□□□ -2
CDC27-219ENST00000576484 CMC1Q7Z7K0 106 aa2.56□□□□□ -2
CDC27-219ENST00000576484 GATSQ8NAP1 163 aa2.56□□□□□ -2
CDC27-219ENST00000576484 OR52E2Q8NGJ4 325 aa2.56□□□□□ -2
CDC27-219ENST00000576484 APH1BQ8WW43 257 aa2.56□□□□□ -2
CDC27-219ENST00000576484 DCPSQ96C86 337 aaKnown RBP2.56□□□□□ -2
CDC27-219ENST00000576484 SULT4A1Q9BR01 284 aa2.56□□□□□ -2
CDC27-219ENST00000576484 LZTS2Q9BRK4 669 aa2.56□□□□□ -2
CDC27-219ENST00000576484 TMEM165Q9HC07 324 aa2.56□□□□□ -2
CDC27-219ENST00000576484 RETNQ9HD89 108 aa2.56□□□□□ -2
CDC27-219ENST00000576484 FBXO6Q9NRD1 293 aaPredicted RBP2.56□□□□□ -2
CDC27-219ENST00000576484 COL27A1Q8IZC6 1860 aaPredicted RBP2.56□□□□□ -2
CDC27-219ENST00000576484 IGKV1-8A0A0C4DH67 115 aa2.55□□□□□ -2
CDC27-219ENST00000576484 AQP8O94778 261 aa2.55□□□□□ -2
CDC27-219ENST00000576484 CRADDP78560 199 aa2.55□□□□□ -2
CDC27-219ENST00000576484 ZNF616Q08AN1 781 aa2.55□□□□□ -2
CDC27-219ENST00000576484 PSMD5Q16401 504 aa2.55□□□□□ -2
CDC27-219ENST00000576484 TCEAL5Q5H9L2 206 aa2.55□□□□□ -2
CDC27-219ENST00000576484 CCDC183Q5T5S1 534 aa2.55□□□□□ -2
CDC27-219ENST00000576484 AP1ARQ63HQ0 302 aa2.55□□□□□ -2
CDC27-219ENST00000576484 UNQ9165/PRO28630Q6UXU0 137 aa2.55□□□□□ -2
CDC27-219ENST00000576484 NPSR1Q6W5P4 371 aa2.55□□□□□ -2
CDC27-219ENST00000576484 DENND4AQ7Z401 1863 aa2.55□□□□□ -2
CDC27-219ENST00000576484 MRPL55Q7Z7F7 128 aaKnown RBP2.55□□□□□ -2
CDC27-219ENST00000576484 CBLN2Q8IUK8 224 aa2.55□□□□□ -2
CDC27-219ENST00000576484 NKAIN4Q8IVV8 208 aa2.55□□□□□ -2
CDC27-219ENST00000576484 PALLDQ8WX93 1383 aa2.55□□□□□ -2
CDC27-219ENST00000576484 TCEAL3Q969E4 200 aa2.55□□□□□ -2
CDC27-219ENST00000576484 PLIN2Q99541 437 aa2.55□□□□□ -2
CDC27-219ENST00000576484 C20orf24Q9BUV8 137 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms