RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ZBTB46Q86UZ6 589 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 ADGRG5Q8IZF4 528 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 PROKR2Q8NFJ6 384 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR10G2Q8NGC3 310 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR9Q1Q8NGQ5 310 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 ELMOD3Q96FG2 381 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 PITX2Q99697 317 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 FAM157AC9JC47 383 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 CLDN25C9JDP6 229 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 SRD5A1P18405 259 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 RPS27P42677 84 aaKnown RBP15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 TNFAIP6P98066 277 aaPredicted RBP15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 COX10Q12887 443 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 HLXQ14774 488 aaPredicted RBP15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 SLC36A3Q495N2 470 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 FAM209AQ5JX71 171 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 SLC18B1Q6NT16 456 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 LYPD4Q6UWN0 246 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 SLC37A3Q8NCC5 494 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR2Z1Q8NG97 314 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR2AJ1Q8NGZ0 328 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR4Q3Q8NH05 313 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 ZNRF4Q8WWF5 429 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 COQ7Q99807 217 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 NIPSNAP1Q9BPW8 284 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 EGLN1Q9GZT9 426 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 HDHD2Q9H0R4 259 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 WDR76Q9H967 626 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 MRPL22Q9NWU5 206 aaKnown RBP15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 IL20Q9NYY1 176 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 KLHL21Q9UJP4 597 aa15.1■□□□□ 0.01
CTDNEP1-207ENST00000572043 NAV3Q8IVL0 2385 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 F5H5K5 113 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 GNGT2O14610 69 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 CST1P01037 141 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 ZNF823P16415 610 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 HNF1AP20823 631 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 GGT2P36268 569 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 LIPAP38571 399 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 PRSS12P56730 875 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 HIST1H3AP68431 136 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 TRAP1Q12931 704 aaKnown RBP15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 CRMP1Q14194 572 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 ZMAT1Q5H9K5 638 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 HIST2H3PS2Q5TEC6 136 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 Q6ZR03 302 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 HIST2H3AQ71DI3 136 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 SPATA24Q86W54 205 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 CANT1Q8WVQ1 401 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 CGGBP1Q9UFW8 167 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 WIPI2Q9Y4P8 454 aa15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 NSD1Q96L73 2696 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-207ENST00000572043 ABCA1O95477 2261 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 DHRS12A0PJE2 317 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 ISPDA4D126 451 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 B4DSR2 109 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 GYPBP06028 91 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 DNAL1Q4LDG9 190 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 ZNF362Q5T0B9 420 aaPredicted RBP15.08■□□□□ 0
CTDNEP1-207ENST00000572043 OR2T2Q6IF00 324 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 IQCF1Q8N6M8 205 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 OR2T33Q8NG76 320 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 OR2T4Q8NH00 348 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 GIPC3Q8TF64 312 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 PTP4A1Q93096 173 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 HAVCR1Q96D42 359 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 C1orf159Q96HA4 380 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 COG8Q96MW5 612 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 DCLRE1CQ96SD1 692 aaKnown RBP15.08■□□□□ 0
CTDNEP1-207ENST00000572043 DDOQ99489 341 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 DGCR6LQ9BY27 220 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 DCAF16Q9NXF7 216 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 CYB5R1Q9UHQ9 305 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 TMEFF2Q9UIK5 374 aaPredicted RBP15.08■□□□□ 0
CTDNEP1-207ENST00000572043 ZDHHC8Q9ULC8 765 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 ZANQ9Y493 2812 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 RTTNQ86VV8 2226 aa15.08■□□□□ 0
CTDNEP1-207ENST00000572043 AQP12BA6NM10 295 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 H3BN98 237 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 CLUP10909 449 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 PSKH1P11801 424 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 KITLGP21583 273 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 TUBG1P23258 451 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 RGS6P49758 472 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 LMO4P61968 165 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 CDK5R2Q13319 367 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 FLOT2Q14254 428 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 RSPO1Q2MKA7 263 aaPredicted RBP15.07■□□□□ 0
CTDNEP1-207ENST00000572043 TMEM179BQ7Z7N9 219 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 NAA40Q86UY6 237 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 GLCCI1Q86VQ1 547 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 AQP12AQ8IXF9 295 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 LNX2Q8N448 690 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 ATG16L2Q8NAA4 619 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 OR5L1Q8NGL2 311 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 POP5Q969H6 163 aaKnown RBP15.07■□□□□ 0
CTDNEP1-207ENST00000572043 APOBEC3DQ96AK3 386 aaPredicted RBP15.07■□□□□ 0
CTDNEP1-207ENST00000572043 OTULINQ96BN8 352 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 SLC7A6OSQ96CW6 309 aaPredicted RBP15.07■□□□□ 0
CTDNEP1-207ENST00000572043 TIMD4Q96H15 378 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms