RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TSSK2Q96PF2 358 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 ARPC5LQ9BPX5 153 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 PBX4Q9BYU1 374 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 NMES1Q9C002 83 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 B3GNT4Q9C0J1 378 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 NARFLQ9H6Q4 476 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 TAS2R3Q9NYW6 316 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 SEMA5BQ9P283 1151 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 ATXN7L1Q9ULK2 861 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 PRELID1Q9Y255 219 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 HDGFL3Q9Y3E1 203 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 TRAV8-7A0A075B6U6 113 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CPED1A4D0V7 1026 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 GJE1A6NN92 205 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ZNF726A6NNF4 738 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 A8MUA0 341 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ATXN7O15265 892 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 NARSO43776 548 aaKnown RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 FADS1O60427 444 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 DOK2O60496 412 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 EIF1BO60739 113 aaKnown RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ZFAND5O76080 213 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 STK17BO94768 372 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 VAMP5O95183 116 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 RLN2P04090 185 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CLPSP04118 112 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 GP1BAP07359 652 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 HEXBP07686 556 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ADRB1P08588 477 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ITGA5P08648 1049 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 NMBP08949 121 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 SRFP11831 508 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CXCL2P19875 107 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 IL32P24001 234 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 LAP3P28838 519 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 DLSTP36957 453 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 FBXW4P57775 412 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CLRN1P58418 232 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 HSF1Q00613 529 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ERV3-1Q14264 604 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 GFOD2Q3B7J2 385 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 SCGB2B2Q4G0G5 96 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 TMEM128Q5BJH2 165 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 SLC25A53Q5H9E4 307 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 C3orf33Q6P1S2 294 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ARSKQ6UWY0 536 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 DOK3Q7L591 496 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 DCXRQ7Z4W1 244 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 TMED4Q7Z7H5 227 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 MARCH3Q86UD3 253 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 SVBPQ8N300 66 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CHST4Q8NCG5 386 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 SLC26A10Q8NG04 563 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 OR1M1Q8NGA1 313 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 OR8S1Q8NH09 359 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ZPLD1Q8TCW7 415 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 MITD1Q8WV92 249 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ASB10Q8WXI3 467 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ST8SIA2Q92186 375 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 AQP3Q92482 292 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ARL11Q969Q4 196 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ABHD17AQ96GS6 310 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 RPP25Q9BUL9 199 aaKnown RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 GAREM1Q9H706 876 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 RAB18Q9NP72 206 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 TMEM74BQ9NUR3 256 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 TAS2R4Q9NYW5 299 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CLEC1BQ9P126 229 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 PPP4R1LQ9P1A2 415 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 DNAJB11Q9UBS4 358 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 ZNF391Q9UJN7 358 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 GDF2Q9UK05 429 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 NXT1Q9UKK6 140 aaKnown RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 EDARQ9UNE0 448 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 SLC22A13Q9Y226 551 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 COA3Q9Y2R0 106 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-250ENST00000568290 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 CLDN16Q9Y5I7 305 aa6.84□□□□□ -1.31
ATXN3-250ENST00000568290 IGHV5-51A0A0C4DH38 117 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 A0A1B0GTI1 187 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 LOC102725191A0A1B0GVB3 256 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SERPINE3A8MV23 424 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 IDSB3KWA1 339 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 F5H0A9 414 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 HRKO00198 91 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ETV2O00321 342 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 LDLRAD4O15165 306 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 YKT6O15498 198 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 CSRP1P21291 193 aaKnown RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 CNR1P21554 472 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 PSMB6P28072 239 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 MPGP29372 298 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF93P35789 620 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 OR3A2P47893 321 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 RNF4P78317 190 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms