RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 GASTP01350 101 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 LIPAP38571 399 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 COX10Q12887 443 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 ZMAT1Q5H9K5 638 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 CFAP77Q6ZQR2 320 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 Q6ZR03 302 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 ZBTB46Q86UZ6 589 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 GLCCI1Q86VQ1 547 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 CYB561A3Q8NBI2 242 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 AQP11Q8NBQ7 271 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 GJC3Q8NFK1 279 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 CCL17Q92583 94 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 CMBLQ96DG6 245 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 COQ7Q99807 217 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 EGLN1Q9GZT9 426 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 HDHD2Q9H0R4 259 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 TBC1D23Q9NUY8 699 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 PTTG3PQ9NZH4 202 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 TMEFF2Q9UIK5 374 aaPredicted RBP16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 ZDHHC8Q9ULC8 765 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 WIPI2Q9Y4P8 454 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 U3KQV3 271 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 UBOX5O94941 541 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 HLA-DQA2P01906 255 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 MSMBP08118 114 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 CD55P08174 381 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 KITLGP21583 273 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 PYCR1P32322 319 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 RBMXP38159 391 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 TNFAIP6P98066 277 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 CDK5R2Q13319 367 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 HLXQ14774 488 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 FAM98BQ52LJ0 330 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 OR2T5Q6IEZ7 315 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 SLC18B1Q6NT16 456 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 RPL13AP3Q6NVV1 102 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 ZNF771Q7L3S4 317 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 LINC00471Q8N535 108 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 OR2T29Q8NH02 315 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 ASB9Q96DX5 294 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 DCLRE1CQ96SD1 692 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 ZNF665Q9H7R5 613 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 REEP1Q9H902 201 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 MRPL22Q9NWU5 206 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 TAS2R1Q9NYW7 299 aa16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 SAMHD1Q9Y3Z3 626 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-203ENST00000564272 TUBG1P23258 451 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 RGS6P49758 472 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 SRSF2Q01130 221 aaKnown RBP16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 RASSF6Q6ZTQ3 369 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 OR5AS1Q8N127 324 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 OR2Z1Q8NG97 314 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 TMEM186Q96B77 213 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 HAVCR1Q96D42 359 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 TIMD4Q96H15 378 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 LRGUKQ96M69 825 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 COG8Q96MW5 612 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 DIRC2Q96SL1 478 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 TUBG2Q9NRH3 451 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 HIF1ANQ9NWT6 349 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 DCAF16Q9NXF7 216 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 IL20Q9NYY1 176 aa16.92■□□□□ 0.3
SHCBP1-203ENST00000564272 SOX14O95416 240 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 GGT2P36268 569 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 MICAQ29983 383 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 RSPO1Q2MKA7 263 aaPredicted RBP16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 SLC36A3Q495N2 470 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 SLC37A3Q8NCC5 494 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 PROKR2Q8NFJ6 384 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 OR51F2Q8NH61 342 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 ZNRF4Q8WWF5 429 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 PTP4A1Q93096 173 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 APOBEC3DQ96AK3 386 aaPredicted RBP16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 DDOQ99489 341 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 PITX2Q99697 317 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 THTPAQ9BU02 230 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 TSSK6Q9BXA6 273 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 C1orf21Q9H246 121 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 PNRC2Q9NPJ4 139 aaKnown RBP16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 ARMC1Q9NVT9 282 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 CYB5R1Q9UHQ9 305 aa16.91■□□□□ 0.3
SHCBP1-203ENST00000564272 ISPDA4D126 451 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 TVP23AA6NH52 213 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 J3QW42 95 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 ACOT8O14734 319 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 DEAF1O75398 565 aaPredicted RBP16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 RAC2P15153 192 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 SRP14P37108 136 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 RPS27P42677 84 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 KRTAP27-1Q3LI81 207 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 ZNF362Q5T0B9 420 aaPredicted RBP16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 OR2T2Q6IF00 324 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 LYPD4Q6UWN0 246 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 FBXW12Q6X9E4 464 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 PHC2Q8IXK0 858 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 ADGRG5Q8IZF4 528 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 OR51L1Q8NGJ5 315 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 OR9Q1Q8NGQ5 310 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 OR2AJ1Q8NGZ0 328 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 OR4Q3Q8NH05 313 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms