RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GYPBP06028 91 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 OR4A8P0C604 315 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 IGHV4-31P0DP07 118 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 CLUP10909 449 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 ZNF16P17020 682 aaPredicted RBP13.48□□□□□ -0.25
USB1-208ENST00000563207 SLC2A5P22732 501 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 GSTT1P30711 240 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 APLNRP35414 380 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 SERPINF1P36955 418 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 ENTPD1P49961 510 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 HIST1H3AP68431 136 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 TMED1Q13445 227 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 RAB39AQ14964 217 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 PCK2Q16822 640 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 TBC1D28Q2M2D7 210 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 SLC25A30Q5SVS4 291 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 HIST2H3PS2Q5TEC6 136 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 LCN1P1Q5VSP4 162 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 TTC23Q5W5X9 447 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 HIST2H3AQ71DI3 136 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 ZNF584Q8IVC4 421 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 SLC30A7Q8NEW0 376 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 OR51L1Q8NGJ5 315 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 OR2AJ1Q8NGZ0 328 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 FAM81AQ8TBF8 368 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 ZNRF4Q8WWF5 429 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 IPCEF1Q8WWN9 437 aaPredicted RBP13.48□□□□□ -0.25
USB1-208ENST00000563207 TEAD3Q99594 435 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 VRK1Q99986 396 aaPredicted RBP13.48□□□□□ -0.25
USB1-208ENST00000563207 HCAR1Q9BXC0 346 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 MED20Q9H944 212 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 FAM118AQ9NWS6 357 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 RRP15Q9Y3B9 282 aaKnown RBP13.48□□□□□ -0.25
USB1-208ENST00000563207 SPEF1Q9Y4P9 236 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 GMPPBQ9Y5P6 360 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 VWC2LB2RUY7 222 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 DLGAP1O14490 977 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 SGCEO43556 437 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 GPANK1O95872 356 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 ZNF35P13682 527 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 STOMP27105 288 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 THBS4P35443 961 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 DSCR9P59020 149 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
USB1-208ENST00000563207 ECH1Q13011 328 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 APOFQ13790 326 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 MEP1BQ16820 701 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 MSMPQ1L6U9 139 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 AADACL4Q5VUY2 407 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 MEDAGQ5VYS4 303 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 UNQ6126/PRO20091Q6UXV3 157 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 IL17RELQ6ZVW7 336 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 C1orf174Q8IYL3 243 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 CPEB3Q8NE35 698 aaKnown RBP13.47□□□□□ -0.25
USB1-208ENST00000563207 RFKQ969G6 155 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 IL4I1Q96RQ9 567 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 INTS14Q96SY0 518 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 SOX7Q9BT81 388 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 WNT5BQ9H1J7 359 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 PLEK2Q9NYT0 353 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 PMF1-BGLAPU3KQ54 211 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 MALRD1Q5VYJ5 2156 aa13.47□□□□□ -0.25
USB1-208ENST00000563207 IGHV2OR16-5A0A0B4J2B6 119 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 TMEM129A0AVI4 362 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 SNTNA6NMZ2 147 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 VSTM5A8MXK1 200 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 ZNF593O00488 134 aaPredicted RBP13.46□□□□□ -0.25
USB1-208ENST00000563207 DOK2O60496 412 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 SLC25A16P16260 332 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 RPS7P62081 194 aaKnown RBP13.46□□□□□ -0.25
USB1-208ENST00000563207 SRSF2Q01130 221 aaKnown RBP13.46□□□□□ -0.25
USB1-208ENST00000563207 GGTLC2Q14390 218 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 CARTPTQ16568 116 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 SLC18B1Q6NT16 456 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 ARL9Q6T311 187 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 RHOUQ7L0Q8 258 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.25
USB1-208ENST00000563207 TIGD4Q8IY51 512 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 DHRSXQ8N5I4 330 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 ZNF511Q8NB15 262 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 NUP37Q8NFH4 326 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 APOL4Q9BPW4 351 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 CDH20Q9HBT6 801 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 HAO2Q9NYQ3 351 aa13.46□□□□□ -0.25
USB1-208ENST00000563207 WARS2Q9UGM6 360 aaKnown RBP13.46□□□□□ -0.25
USB1-208ENST00000563207 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 OR6C6A6NF89 314 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 H0YAE9 185 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 SYNGR3O43761 229 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 USF1P22415 310 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms