RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CIRBP-AS1Q8TBR5 109 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 SLC2A14Q8TDB8 520 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 NEURL3Q96EH8 262 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 TPD52L3Q96J77 140 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 CHCHD7Q9BUK0 85 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 RACGAP1Q9H0H5 632 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 NEK6Q9HC98 313 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 CTNNA3Q9UI47 895 aa1.41□□□□□ -2.18
CHD9-207ENST00000562806 COL27A1Q8IZC6 1860 aaPredicted RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 SMCO3A2RU48 225 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 SIRPB1O00241 398 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 TAAR5O14804 337 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 RAB29O14966 203 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 RDH16O75452 317 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 CYB5R3P00387 301 aaPredicted RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 ZNF806P0C7X5 589 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 ATF6P18850 670 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 EIF2S2P20042 333 aaKnown RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 ACLYP53396 1101 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 PRR3P79522 188 aaKnown RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 CDK5Q00535 292 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 PPIDQ08752 370 aaKnown RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 DDX39BQ13838 428 aaKnown RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 RNASE13Q5GAN3 156 aaKnown RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 C9orf135Q5VTT2 229 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 ZFAND6Q6FIF0 208 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 TTC23LQ6PF05 361 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 NPSR1Q6W5P4 371 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 IQCKQ8N0W5 287 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 NPWQ8N729 165 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 KLF14Q8TD94 323 aaPredicted RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 GON7Q9BXV9 100 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 MED4Q9NPJ6 270 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 TMEM9BQ9NQ34 198 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 CCDC59Q9P031 241 aaKnown RBP1.4□□□□□ -2.19
CHD9-207ENST00000562806 UBIAD1Q9Y5Z9 338 aa1.4□□□□□ -2.19
CHD9-207ENST00000562806 IGLV1-36A0A0B4J1U3 117 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 TMEM120BA0PK00 339 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 C5orf63A6NC05 138 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 A6NDN8 102 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 FAM47DPA6NHR8 397 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 PLIN3O60664 434 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 WBP4O75554 376 aaKnown RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 U2AF2P26368 475 aaKnown RBP eCLIP1.39□□□□□ -2.19
CHD9-207ENST00000562806 TGFBR1P36897 503 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 TALDO1P37837 337 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 MPV17P39210 176 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 RBM34P42696 430 aaKnown RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 KIR3DL2P43630 455 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 RND2P52198 227 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 TEX30Q5JUR7 227 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 GPR107Q5VW38 600 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 SASS6Q6UVJ0 657 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 MRPL55Q7Z7F7 128 aaKnown RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 CMC1Q7Z7K0 106 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 NT5DC3Q86UY8 548 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 CBR4Q8N4T8 237 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 SLC35G3Q8N808 338 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 PRELID2Q8N945 189 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 ZNF680Q8NEM1 530 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 OR11H7Q8NGC8 314 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 OR6Q1Q8NGQ2 317 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 TVP23CQ96ET8 276 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 IP6K3Q96PC2 410 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 CENPKQ9BS16 269 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 FGF23Q9GZV9 251 aaPredicted RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 TOLLIPQ9H0E2 274 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 SLC38A10Q9HBR0 1119 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 C8orf17Q9NRJ1 99 aa1.39□□□□□ -2.19
CHD9-207ENST00000562806 PDP1Q9P0J1 537 aaPredicted RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 CSDC2Q9Y534 153 aaKnown RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 TSSC4Q9Y5U2 329 aaPredicted RBP1.39□□□□□ -2.19
CHD9-207ENST00000562806 ATAD2BQ9ULI0 1458 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 IGHV1-3A0A0C4DH29 117 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 TRBV11-1A0A0K0K1C0 115 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 A0A1B0GUH1 482 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 HEATR9A2RTY3 570 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 OR6C70A6NIJ9 312 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 PDZK1P1A8MUH7 402 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 BTNL10A8MVZ5 291 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 SMKR1H3BMG3 65 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 POLR1CO15160 346 aaPredicted RBP1.38□□□□□ -2.19
CHD9-207ENST00000562806 CLOCKO15516 846 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 RAD51CO43502 376 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 FGFR1OPO95684 399 aaKnown RBP1.38□□□□□ -2.19
CHD9-207ENST00000562806 SERPINA3P01011 423 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 ARG1P05089 322 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 ASGR1P07306 291 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 ACSM4P0C7M7 580 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 GGT1P19440 569 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 OTX1P32242 354 aaPredicted RBP1.38□□□□□ -2.19
CHD9-207ENST00000562806 PCK1P35558 622 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 PRLHRP49683 370 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 GFERP55789 205 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 RAB10P61026 200 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 ACTR3P61158 418 aa1.38□□□□□ -2.19
CHD9-207ENST00000562806 RPS11P62280 158 aaKnown RBP eCLIP1.38□□□□□ -2.19
CHD9-207ENST00000562806 MAD2L1BPQ15013 274 aaPredicted RBP1.38□□□□□ -2.19
CHD9-207ENST00000562806 ZNF726P1Q15940 193 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms