RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ELOBQ15370 118 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLC25A46Q96AG3 418 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 ATP23Q9Y6H3 246 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 PLIN4Q96Q06 1357 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 M0R3E3 92 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 LYZL6O75951 148 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 RAB38P57729 211 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 CLLU1Q5K131 121 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLC26A10Q8NG04 563 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 OLIG1Q8TAK6 271 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM174AQ8TBP5 190 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZPBPQ9BS86 351 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 GPR75O95800 540 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 LIPIQ6XZB0 460 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 APCDD1Q8J025 514 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 MRPL37Q9BZE1 423 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMED7Q9Y3B3 224 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 SERINC4A6NH21 518 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 G3V2L1 256 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 G3V3Y1 287 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 KLRC4-KLRK1H3BQV0 150 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 DNPH1O43598 174 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 LRP3O75074 770 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM3AP98173 230 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 PRAMEF20Q5VT98 475 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 LMAN1LQ9HAT1 526 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 MMP26Q9NRE1 261 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 CORINQ9Y5Q5 1042 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 NAV1Q8NEY1 1877 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 H7C1C5 153 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ARNTLO00327 626 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 IRS1P35568 1242 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 PRSS45Q7RTY3 260 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 MYPOPQ86VE0 399 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 GABRG1Q8N1C3 465 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 BANF2Q9H503 90 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZNF541Q9H0D2 1346 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 CA12O43570 354 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 TBX19O60806 448 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLC25A5P05141 298 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 PRSS1P07477 247 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 HIST1H1TP22492 207 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 EXT1Q16394 746 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 OTUD1Q5VV17 481 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM131CQ96AQ9 280 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 JAM3Q9BX67 310 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 A0A087WV62 115 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 DCDP81605 110 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 TRMT12Q53H54 448 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 SOWAHCQ53LP3 525 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 Q56UQ5 140 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR1L4Q8NGR5 311 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ARRDC2Q8TBH0 407 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZFPM2Q8WW38 1151 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ADAT1Q9BUB4 502 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 TRAPPC4Q9Y296 219 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ACOT8O14734 319 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 MT-ATP6P00846 226 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 LIMS3P0CW19 117 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 LIMS4P0CW20 117 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 GLRA1P23415 457 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZADH2Q8N4Q0 377 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR52N1Q8NH53 320 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 C19orf43Q9BQ61 176 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 CEBPDP49716 269 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR5AS1Q8N127 324 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 C2orf50Q96LR7 162 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 RRP8O43159 456 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 HOXA4Q00056 320 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR51F2Q8NH61 342 aa12.69□□□□□ -0.38
CSPG4P12-202ENST00000559989 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 PRSS38A1L453 326 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 C21orf58P58505 322 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR2B11Q5JQS5 317 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 GOT1L1Q8NHS2 421 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMEM238LA0A1B0GVL6 79 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 A6NJY4 79 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 PGGT1BP53609 377 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMEM208Q9BTX3 173 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 MEGF6O75095 1541 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 RGS13O14921 159 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 ACHEP22303 614 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 MYOZ3Q8TDC0 251 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 PHYHIPLQ96FC7 376 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZDHHC5Q9C0B5 715 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMEM191AQ9H0A3 160 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 P2RY12Q9H244 342 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 GPR45Q9Y5Y3 372 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 CYR61O00622 381 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms