RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 FBXO6Q9NRD1 293 aaPredicted RBP1.63□□□□□ -2.15
VPS13C-207ENST00000558919 LSM7Q9UK45 103 aaKnown RBP1.63□□□□□ -2.15
VPS13C-207ENST00000558919 ING4Q9UNL4 249 aa1.63□□□□□ -2.15
VPS13C-207ENST00000558919 ST3GAL6Q9Y274 331 aa1.63□□□□□ -2.15
VPS13C-207ENST00000558919 AKNAQ7Z591 1439 aa1.63□□□□□ -2.15
VPS13C-207ENST00000558919 DENND4AQ7Z401 1863 aa1.63□□□□□ -2.15
VPS13C-207ENST00000558919 NSD2O96028 1365 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 CNTNAP1P78357 1384 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 IGKV2-24A0A0C4DH68 120 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 ZNF816-ZNF321PA0A0X1KG74 233 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 OR6C74A6NCV1 312 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 LRRIQ3A6PVS8 624 aaPredicted RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 H0YJW9 148 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 RAB29O14966 203 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 PPP1R2P9O14990 202 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 CLOCKO15516 846 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 CLPXO76031 633 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 FTH1P02794 183 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 OR8U9P0C7N5 309 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 RRM2P31350 389 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 TMED10P49755 219 aaKnown RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 ADARB1P78563 741 aaKnown RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 CUL2Q13617 745 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 HSP90AB3PQ58FF7 597 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 SPIN3Q5JUX0 258 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 C9orf135Q5VTT2 229 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 ANKRD26P1Q6NSI1 321 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 SPINT4Q6UDR6 99 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 METTL13Q8N6R0 699 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 APCDD1LQ8NCL9 501 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 ACMSDQ8TDX5 336 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 KIFAP3Q92845 792 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 PTX4Q96A99 478 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 MCUR1Q96AQ8 359 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 PKNOX2Q96KN3 472 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 TGS1Q96RS0 853 aaKnown RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 CHP1Q99653 195 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 FRMD8P1Q9BZ68 369 aaPredicted RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 NEK6Q9HC98 313 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 FGF20Q9NP95 211 aaPredicted RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 ZNF586Q9NXT0 402 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 CARHSP1Q9Y2V2 147 aaKnown RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 GOLT1BQ9Y3E0 138 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 TSSC4Q9Y5U2 329 aaPredicted RBP1.62□□□□□ -2.15
VPS13C-207ENST00000558919 UBIAD1Q9Y5Z9 338 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 KCNE3Q9Y6H6 103 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 TICRRQ7Z2Z1 1910 aa1.62□□□□□ -2.15
VPS13C-207ENST00000558919 A0A075B6Q4 140 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 IGHV3OR16-8A0A075B7F1 116 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 GLYATL1P3A0A0U1RQE8 302 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 DNASE2O00115 360 aaPredicted RBP1.61□□□□□ -2.15
VPS13C-207ENST00000558919 SIRPB1O00241 398 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 AIM2O14862 343 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 REM1O75628 298 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 OR2J3O76001 311 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 H6PDO95479 791 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 CLIC3O95833 236 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 ANXA5P08758 320 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 CD3GP09693 182 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 P0C880 135 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 RAB3AP20336 220 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 CEACAM3P40198 252 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 VSX2P58304 361 aaPredicted RBP1.61□□□□□ -2.15
VPS13C-207ENST00000558919 RAB10P61026 200 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 CCNA1P78396 465 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 TGM3Q08188 693 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 RCN1Q15293 331 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 SPANXN2Q5MJ10 180 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 PRAMEF20Q5VT98 475 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 CENPQQ7L2Z9 268 aaPredicted RBP1.61□□□□□ -2.15
VPS13C-207ENST00000558919 SNX20Q7Z614 316 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 SCD5Q86SK9 330 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 IQCKQ8N0W5 287 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 TMEM105Q8N8V8 129 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 SPANXA2-OT1Q8N9U9 137 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 SLC29A1Q99808 456 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 FAM192AQ9GZU8 254 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 LHX5Q9H2C1 402 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 OR51M1Q9H341 326 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 TMEM185BQ9H7F4 350 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 VPS37BQ9H9H4 285 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 ZNF160Q9HCG1 818 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 EXOSC4Q9NPD3 245 aaKnown RBP1.61□□□□□ -2.15
VPS13C-207ENST00000558919 RAB20Q9NX57 234 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 UXTQ9UBK9 157 aaPredicted RBP1.61□□□□□ -2.15
VPS13C-207ENST00000558919 PITPNC1Q9UKF7 332 aa1.61□□□□□ -2.15
VPS13C-207ENST00000558919 NINLQ9Y2I6 1382 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 ZNF98A6NK75 572 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 OR2AG2A6NM03 316 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 C16orf90A8MZG2 172 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 NDUFAB1O14561 156 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 OR2F2O95006 317 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 HLA-DQB1P01920 261 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 SLC1A1P43005 524 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 C21orf59P57076 290 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 RGS8P57771 180 aaPredicted RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 RPS15P62841 145 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 CRADDP78560 199 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 SLC25A11Q02978 314 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 IL15RAQ13261 267 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms