RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
EFCAB11-212ENST00000556639 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
EFCAB11-212ENST00000556639 AKR7LQ8NHP1 331 aa12.12□□□□□ -0.47
EFCAB11-212ENST00000556639 GFI1Q99684 422 aa12.12□□□□□ -0.47
EFCAB11-212ENST00000556639 DDX28Q9NUL7 540 aaKnown RBP12.12□□□□□ -0.47
EFCAB11-212ENST00000556639 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 A6NIN4 97 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF32P17041 273 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 HSD11B1P28845 292 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF121P58317 390 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 HIST1H3AP68431 136 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 HIST2H3PS2Q5TEC6 136 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ASPHD2Q6ICH7 369 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 HIST2H3AQ71DI3 136 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 GJC3Q8NFK1 279 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ATF6BQ99941 703 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 PBOV1Q9GZY1 135 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 PLEK2Q9NYT0 353 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 UPB1Q9UBR1 384 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF175Q9Y473 711 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 A0A0B4J203 849 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF503-AS2A6NEH8 195 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 F5H5K5 113 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 RGS5O15539 181 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 TTRP02766 147 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 SRMP19623 302 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 MYL9P24844 172 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 MMP16P51512 607 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 FOXF2Q12947 444 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 INAQ16352 499 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 C3P1Q6ZMU1 363 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 TEX19Q8NA77 164 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 LINC00470Q9BZP3 86 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF224Q9NZL3 707 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 COMMD3Q9UBI1 195 aa12.11□□□□□ -0.47
EFCAB11-212ENST00000556639 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 A0A075B6Q4 140 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 NPR2P20594 1047 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 CX3CR1P49238 355 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ACSF3Q4G176 576 aaPredicted RBP12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 SFRP5Q5T4F7 317 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 BCL2L15Q5TBC7 163 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 SLC16A14Q7RTX9 510 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 HAVCR2Q8TDQ0 301 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 GPR148Q8TDV2 347 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 TSEN15Q8WW01 171 aaKnown RBP12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 GPR137Q96N19 417 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ABCB9Q9NP78 766 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 LOC107986453A0A1B0GWG9 222 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 CST2P09228 141 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ACSM4P0C7M7 580 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ADRA2CP18825 462 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 TNFSF8P32971 234 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 PSG4Q00888 419 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 HGFACQ04756 655 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 SEM1Q6ZVN7 128 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 FAM57BQ71RH2 274 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF283Q8N7M2 679 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 DNAAF1Q8NEP3 725 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 ASB5Q8WWX0 329 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 DAPK2Q9UIK4 370 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 A3GALT2U3KPV4 340 aa12.1□□□□□ -0.47
EFCAB11-212ENST00000556639 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 TRAV1-2A0A0B4J238 106 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 IQCMA0A1B0GVH7 501 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 CLDN25C9JDP6 229 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 ARL6IP5O75915 188 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 PAHP00439 452 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 ABOP16442 354 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 RAB3BP20337 219 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 THBS2P35442 1172 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF829Q3KNS6 432 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 SFXN4Q6P4A7 337 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 PRSS45Q7RTY3 260 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 ZNF433Q8N7K0 673 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 OR51E1Q8TCB6 317 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 NOX3Q9HBY0 568 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 SGCEO43556 437 aa12.09□□□□□ -0.47
EFCAB11-212ENST00000556639 HLA-HP01893 362 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms