RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 WACQ9BTA9 647 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 FUNDC2Q9BWH2 189 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 C1QTNF6Q9BXI9 259 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 FAM192AQ9GZU8 254 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 C1orf198Q9H425 327 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 ERGIC3Q9Y282 383 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SF3B6Q9Y3B4 125 aaKnown RBP9.5□□□□□ -0.89
SHMT2-218ENST00000555213 RNF115Q9Y4L5 304 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 PKDREJQ9NTG1 2253 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 IQCMA0A1B0GVH7 501 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF593O00488 134 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 ABCD4O14678 606 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CTAG2O75638 210 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 IGKV3-15P01624 115 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CRYAAP02489 173 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 HRGP04196 525 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 ALOX5APP20292 161 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CD40P25942 277 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 ATP6V1E1P36543 226 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 RPS27P42677 84 aaKnown RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 RGS6P49758 472 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 OR12D2P58182 307 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 LSM6P62312 80 aaKnown RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 RAB1AP62820 205 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 SCRN3Q0VDG4 424 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 POU4F2Q12837 409 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 AQP6Q13520 282 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 TPBGQ13641 420 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 MED22Q15528 200 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 KCNMB1Q16558 191 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CTF1Q16619 201 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 MEP1BQ16820 701 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CDONQ4KMG0 1287 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 TEX30Q5JUR7 227 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 NCMAPQ5T1S8 102 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 LCN1P1Q5VSP4 162 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 SEZ6L2Q6UXD5 910 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 ANKRD13BQ86YJ7 626 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CLVS1Q8IUQ0 354 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 OR10H4Q8NGA5 316 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 OR6K6Q8NGW6 343 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 OR52N1Q8NH53 320 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 SPRYD4Q8WW59 207 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 HTRA1Q92743 480 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CNN2Q99439 309 aaKnown RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 MND1Q9BWT6 205 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 YIPF3Q9GZM5 350 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 ISYNA1Q9NPH2 558 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 INPP5EQ9NRR6 644 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 NPAP1Q9NZP6 1156 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CRNNQ9UBG3 495 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 KCNG2Q9UJ96 466 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 POU2F3Q9UKI9 436 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 EDARQ9UNE0 448 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 CAB39Q9Y376 341 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-218ENST00000555213 TIMM10BQ9Y5J6 103 aa9.49□□□□□ -0.89
SHMT2-218ENST00000555213 TEX15Q9BXT5 2789 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 DAPL1A0PJW8 107 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 IGLV1-44P01699 117 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF823P16415 610 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 PSMB9P28065 219 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 TTKP33981 857 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 GTF2A1P52655 376 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-218ENST00000555213 WNT4P56705 351 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ADAM5Q6NVV9 412 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 SLC22A25Q6T423 547 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF704Q6ZNC4 412 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-218ENST00000555213 SYT9Q86SS6 491 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ALDH16A1Q8IZ83 802 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 IL17RDQ8NFM7 739 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 OR1J2Q8NGS2 313 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 OR2AJ1Q8NGZ0 328 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 C11orf40Q8WZ69 217 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ALG8Q9BVK2 526 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF416Q9BWM5 594 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 CDADC1Q9BWV3 514 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 VCX3AQ9NNX9 186 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 EMC7Q9NPA0 242 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 BABAM2Q9NXR7 383 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 B3GNT2Q9NY97 397 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF224Q9NZL3 707 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 ASH2LQ9UBL3 628 aa9.48□□□□□ -0.89
SHMT2-218ENST00000555213 IGHV1-18A0A0C4DH31 117 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 FAM221AA4D161 298 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF503-AS2A6NEH8 195 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 DPRXA6NFQ7 191 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 OGG1O15527 345 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 SIAH2O43255 324 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 TMCC2O75069 709 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ATE1O95260 518 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ABHD16AO95870 558 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 SERPINA5P05154 406 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 CECR9P0C854 216 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 CD36P16671 472 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 CPEP16870 476 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF32P17041 273 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 MYL12AP19105 171 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 NR4A1P22736 598 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms