RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CA11O75493 328 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 CIB2O75838 187 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 NDUFB10O96000 172 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 HPGDP15428 266 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 RFX3P48380 749 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 NMUP48645 174 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 GPX6P59796 221 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 RPS21P63220 83 aaKnown RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 LRRC74AQ0VAA2 488 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 SRSF5Q13243 272 aaKnown RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 MADCAM1Q13477 382 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 SSX2Q16385 188 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 MRPL23Q16540 153 aaKnown RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 ZBED5Q49AG3 693 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 SASS6Q6UVJ0 657 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 TMEM107Q6UX40 140 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 Q6ZSR3 168 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 MDS2Q8NDY4 140 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 B3GNT7Q8NFL0 401 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 OR56B2PQ8NGI1 322 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 BLOC1S5Q8TDH9 187 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 KIFAP3Q92845 792 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 TMEM54Q969K7 222 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 NUP58Q9BVL2 599 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 PKIBQ9C010 78 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 CDC42EP4Q9H3Q1 356 aaKnown RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 RANBP3Q9H6Z4 567 aaPredicted RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 TM9SF3Q9HD45 589 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 PSMC3IPQ9P2W1 217 aaPredicted RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 PCYOX1Q9UHG3 505 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 ZNF223Q9UK11 482 aaPredicted RBP3.31□□□□□ -1.88
CHD8-207ENST00000554384 STARD10Q9Y365 291 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 WSB1Q9Y6I7 421 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 FREM2Q5SZK8 3169 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 WDFY3Q8IZQ1 3526 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 ITPR3Q14573 2671 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 ADGRA3Q8IWK6 1321 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 HIDE1A8MVS5 230 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 TMX2-CTNND1H3BSU7 103 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 RNF13O43567 381 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 CD5LO43866 347 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 TSPAN13O95857 204 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 IGLV2-23P01705 113 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 C2P06681 752 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 CRYGBP07316 175 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 PABPC4LP0CB38 370 aaKnown RBP3.3□□□□□ -1.88
CHD8-207ENST00000554384 ZNF43P17038 809 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 ZNF30P17039 623 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 TNNI1P19237 187 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 IFNA8P32881 189 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 SLC26A3P40879 764 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 Q6ZVH6 145 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 OR51G1Q8NGK1 321 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 OR10G9Q8NGN4 311 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 OR6X1Q8NH79 312 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 MCOLN3Q8TDD5 553 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 GEMIN6Q8WXD5 167 aaKnown RBP3.3□□□□□ -1.88
CHD8-207ENST00000554384 ATP5SQ99766 215 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 SH3GL1Q99961 368 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 DMAP1Q9NPF5 467 aaPredicted RBP3.3□□□□□ -1.88
CHD8-207ENST00000554384 NMRK1Q9NWW6 199 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 LSM7Q9UK45 103 aaKnown RBP3.3□□□□□ -1.88
CHD8-207ENST00000554384 KIAA1257Q9ULG3 409 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 UBR5O95071 2799 aaPredicted RBP3.3□□□□□ -1.88
CHD8-207ENST00000554384 KALRNO60229 2985 aa3.3□□□□□ -1.88
CHD8-207ENST00000554384 ASXL3Q9C0F0 2248 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 CFAP46Q8IYW2 2715 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 NOTCH2Q04721 2471 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 SPTAN1Q13813 2472 aaKnown RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 RSPH10B2B2RC85 870 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 F6UB75 175 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 LAD1O00515 517 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 DLGAP1O14490 977 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 SLC31A2O15432 143 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 DFNA5O60443 496 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 SS18L1O75177 396 aaPredicted RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 CLIC3O95833 236 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ANXA5P08758 320 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 RSPH10BP0C881 870 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 IGHV3-43DP0DP04 118 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 HOXB8P17481 243 aaPredicted RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 ADORA1P30542 326 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 CXCL5P42830 114 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 CSNK1DP48730 415 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ACTA2P62736 377 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ACTG2P63267 376 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ACTC1P68032 377 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ACTA1P68133 377 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 MRPS22P82650 360 aaKnown RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 PAX5Q02548 391 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ZNF92Q03936 586 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 TMEM183BQ1AE95 376 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 ALKBH6Q3KRA9 238 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 LY6G6FQ5SQ64 297 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 NCCRP1Q6ZVX7 275 aaPredicted RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 TMEM183AQ8IXX5 376 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 RAB3IL1Q8TBN0 382 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 SRSF12Q8WXF0 261 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms