RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ERMAPQ96PL5 475 aaPredicted RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 SLC6A7Q99884 636 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 IFT27Q9BW83 186 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 RNF121Q9H920 327 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 SAP30LQ9HAJ7 183 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 DECR2Q9NUI1 292 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 ARMC1Q9NVT9 282 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 PDP1Q9P0J1 537 aaPredicted RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 CDH10Q9Y6N8 788 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 PRSS37A4D1T9 235 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 SOCS2O14508 198 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ARPC3O15145 178 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 IDH3BO43837 385 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ICMTO60725 284 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 SLC2A10O95528 541 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 PPP1R3DO95685 299 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ADH4P08319 380 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 FCGR1AP12314 374 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ADRA2CP18825 462 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 FASP25445 335 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 NOS3P29474 1203 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 GUCA1AP43080 201 aaPredicted RBP10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF81P51508 661 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 MMP15P51511 669 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ACTR3P61158 418 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 FMODQ06828 376 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 KRR1Q13601 381 aaKnown RBP10.04□□□□□ -0.8
CKAP4-202ENST00000552828 MESTQ5EB52 335 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 SLC25A47Q6Q0C1 308 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 CD300LDQ6UXZ3 194 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 TMEM179BQ7Z7N9 219 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ADCK1Q86TW2 530 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 BPIFB2Q8N4F0 458 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 CLDN22Q8N7P3 220 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 RASD2Q96D21 266 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 NRBF2Q96F24 287 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ELMOD3Q96FG2 381 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 MARS2Q96GW9 593 aaKnown RBP10.04□□□□□ -0.8
CKAP4-202ENST00000552828 MYCBPQ99417 103 aaPredicted RBP10.04□□□□□ -0.8
CKAP4-202ENST00000552828 FEVQ99581 238 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF747Q9BV97 191 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 OR51B6Q9H340 312 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 EGLN3Q9H6Z9 239 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 C7orf69Q9H7B7 122 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF556Q9HAH1 456 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 SIAEQ9HAT2 523 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 RNPEPL1Q9HAU8 725 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 NTN4Q9HB63 628 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 IL20Q9NYY1 176 aa10.04□□□□□ -0.8
CKAP4-202ENST00000552828 H7C1C5 153 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 KCNAB3O43448 404 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 TGP01266 2768 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 IGHV1-46P01743 117 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 ANXA8P13928 327 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 FPR2P25090 351 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 STOMP27105 288 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 APLNRP35414 380 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 WNT5AP41221 380 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 LCN6P62502 163 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 UBA52P62987 128 aaKnown RBP10.03□□□□□ -0.8
CKAP4-202ENST00000552828 MRPS34P82930 218 aaKnown RBP10.03□□□□□ -0.8
CKAP4-202ENST00000552828 ATP6AP1Q15904 470 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 TSTQ16762 297 aaKnown RBP10.03□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF718Q3SXZ3 478 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 PABPC1L2AQ5JQF8 200 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 TMEM255AQ5JRV8 349 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 CLEC12AQ5QGZ9 265 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 MBNL2Q5VZF2 373 aaKnown RBP10.03□□□□□ -0.8
CKAP4-202ENST00000552828 JAZF1Q86VZ6 243 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 C1orf174Q8IYL3 243 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF101Q8IZC7 436 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 OR1J1Q8NGS3 322 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 POM121L2Q96KW2 1035 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 KCNN2Q9H2S1 579 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF696Q9H7X3 374 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 TBC1D23Q9NUY8 699 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 VSX1Q9NZR4 365 aaPredicted RBP10.03□□□□□ -0.8
CKAP4-202ENST00000552828 KLHL21Q9UJP4 597 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 UGT2A1Q9Y4X1 527 aa10.03□□□□□ -0.8
CKAP4-202ENST00000552828 LOC100509620A0A075B734 347 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 IGKV1D-43A0A0B4J1Z2 117 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 TPD52L2O43399 206 aaKnown RBP10.02□□□□□ -0.81
CKAP4-202ENST00000552828 RENP00797 406 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 HKR1P10072 659 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 PRKACGP22612 351 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 CDAP32320 146 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 LIPAP38571 399 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 CDKN2AP42771 156 aaKnown RBP10.02□□□□□ -0.81
CKAP4-202ENST00000552828 HSF2Q03933 536 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 SLC3A1Q07837 685 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 KPNB1Q14974 876 aaKnown RBP10.02□□□□□ -0.81
CKAP4-202ENST00000552828 SGCAQ16586 387 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 FAM27BQ5VT28 67 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 UNQ6126/PRO20091Q6UXV3 157 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms