RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 UBE2E3Q969T4 207 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 EFHD2Q96C19 240 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 JSRP1Q96MG2 331 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RUNDC3BQ96NL0 473 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ATP6V0BQ99437 205 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DHRS9Q9BPW9 319 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SLC39A3Q9BRY0 314 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 MED18Q9BUE0 208 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TSPY26PQ9H489 355 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 EGLN3Q9H6Z9 239 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 EML4Q9HC35 981 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 YAE1D1Q9NRH1 226 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 GLRX2Q9NS18 164 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CBLN4Q9NTU7 201 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.96□□□□□ -2.15e-6■□□□□ 9.1
CPSF6-207ENST00000551516 GIN1Q9NXP7 522 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 B3GNT2Q9NY97 397 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RNF14Q9UBS8 474 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 COPS7AQ9UBW8 275 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ELF5Q9UKW6 265 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CHMP2BQ9UQN3 213 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TCF19Q9Y242 345 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 EIF3LQ9Y262 564 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 PPP2R2CQ9Y2T4 447 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RNF115Q9Y4L5 304 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SELENOKQ9Y6D0 94 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 MAD1L1Q9Y6D9 718 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DNAH1Q9P2D7 4330 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 DNAH7Q8WXX0 4024 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CSMD3Q7Z407 3707 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 IGHV4-4A0A075B6R2 117 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 A0A087WZY1 265 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 A0A087X0K7 114 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 IGHV1-18A0A0C4DH31 117 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LRP5LA4QPB2 252 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 A8MVM7 634 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TRIM49D1C9J1S8 452 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SLCO1B7G3V0H7 640 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PGRMC1O00264 195 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 MANBAO00462 879 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF195O14628 629 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TNFSF11O14788 317 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PFDN6O15212 129 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 EIF3HO15372 352 aaKnown RBP eCLIP1.95□□□□□ -2.12e-6■□□□□ 9.4
CPSF6-207ENST00000551516 FCMRO60667 390 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CLN5O75503 358 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 REM1O75628 298 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 FCN3O75636 299 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CLDN9O95484 217 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 STAMBPO95630 424 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 IGKV3-15P01624 115 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 OPN1LWP04000 364 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 GPIP06744 558 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TPM3P06753 285 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 IL3P08700 152 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 GSTA2P09210 222 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF35P13682 527 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SLC25A16P16260 332 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 RPL35AP18077 110 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TNNI3P19429 210 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PGCP20142 388 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF10P21506 573 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ANOS1P23352 680 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ELK4P28324 431 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LCN1P31025 176 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 RBMXP38159 391 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SLC1A3P43003 542 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TMED10P49755 219 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CASP9P55211 416 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LINC01547P58512 204 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PSPHP78330 225 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 MRPS22P82650 360 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF117Q03924 483 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PLCXD2Q0VAA5 305 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 FOXF1Q12946 379 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PDIA2Q13087 525 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LCP2Q13094 533 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 HNRNPA0Q13151 305 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SKP2Q13309 424 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TRIP10Q15642 601 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF141Q15928 474 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF74Q16587 644 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 NRF1Q16656 503 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 DUSP5Q16690 384 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 NDUFAF6Q330K2 333 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PAGE2BQ5JRK9 111 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 KLF17Q5JT82 389 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 FFAR4Q5NUL3 377 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF678Q5SXM1 525 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 KPRPQ5T749 579 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 FBXW9Q5XUX1 488 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CYB5R2Q6BCY4 276 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF770Q6IQ21 691 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 RAB12Q6IQ22 244 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF544Q6NX49 715 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 DHRS11Q6UWP2 260 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SIGLEC15Q6ZMC9 328 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 C18orf65Q6ZTR6 163 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 C3orf62Q6ZUJ4 267 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CHMP1BQ7LBR1 199 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms