RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 EDNRAP25101 427 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 SHC1P29353 583 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 B3GALT5-AS1P59052 145 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 CSNK2A1P68400 391 aaPredicted RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 PCK2Q16822 640 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 FDX2Q6P4F2 183 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 KDM8Q8N371 416 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 OR5M1Q8NGP8 315 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 RNF166Q96A37 237 aaPredicted RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 CCL19Q99731 98 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 KCNS3Q9BQ31 491 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 NAA11Q9BSU3 229 aaPredicted RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 OR2B2Q9GZK3 357 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 RERGLQ9H628 205 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 ACOXLQ9NUZ1 547 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 MRPL22Q9NWU5 206 aaKnown RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 MRM2Q9UI43 246 aaKnown RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 KLHDC2Q9Y2U9 406 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 TRAV1-2A0A0B4J238 106 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 LRRC3CA6NJW4 275 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 LOC110117498-PIK3R3F6TDL0 507 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 LINC01387J3KSC0 135 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 TRAF3IP2O43734 574 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 UPK3AO75631 287 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 CLEC2LP0C7M8 214 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 CTSSP25774 331 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 OPRM1P35372 400 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ROM1Q03395 351 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 MXD1Q05195 221 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 KRTAP1-1Q07627 177 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ACSM3Q53FZ2 586 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SPANXN2Q5MJ10 180 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 THEM4Q5T1C6 240 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 RAET1LQ5VY80 246 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 DPY19L4Q7Z388 723 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 OR6X1Q8NH79 312 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 RBP7Q96R05 134 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 TPK1Q9H3S4 243 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ZNF703Q9H7S9 590 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 BOKQ9UMX3 212 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 GRIP1Q9Y3R0 1128 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 UGT2A1Q9Y4X1 527 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 DSCAMO60469 2012 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 PRR32B1ATL7 298 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ZNF593O00488 134 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 CTDSP2O14595 271 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ARL6IP5O75915 188 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 IL18BPO95998 194 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 TNFSF8P32971 234 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SFTPDP35247 375 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 BIDP55957 195 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SF3B4Q15427 424 aaKnown RBP eCLIP17.53■□□□□ 0.41e-9■■■□□ 18.8
CTDSP2-204ENST00000548823 TMEM225Q6GV28 225 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC18B1Q6NT16 456 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 KCTD18Q6PI47 426 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 CEACAM19Q7Z692 300 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC26A10Q8NG04 563 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ACOT12Q8WYK0 555 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 KCTD12Q96CX2 325 aaKnown RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC25A44Q96H78 314 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 TXNDC15Q96J42 360 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 CEP19Q96LK0 163 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 JSRP1Q96MG2 331 aaPredicted RBP17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 OR8B4Q96RC9 309 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC30A2Q9BRI3 323 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 GSX2Q9BZM3 304 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC6A15Q9H2J7 730 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 TMEM185BQ9H7F4 350 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ZFP64Q9NPA5 681 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 QPCTLQ9NXS2 382 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 ZNF281Q9Y2X9 895 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 CMAHPQ9Y471 501 aa17.53■□□□□ 0.4
CTDSP2-204ENST00000548823 SHISA3A0PJX4 238 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 ANKRD61A6NGH8 418 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 MAGEB4O15481 346 aaPredicted RBP17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 AQP8O94778 261 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 HLA-DQA2P01906 255 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 UCHL1P09936 223 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 RFPL3SP0C7P2 107 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 NR2C1P13056 603 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 ZNF43P17038 809 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 MYL9P24844 172 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 AGFG1P52594 562 aaKnown RBP17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 RPS11P62280 158 aaKnown RBP eCLIP17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 ALKBH1Q13686 389 aaKnown RBP17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 YIF1BQ5BJH7 314 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 ZMAT1Q5H9K5 638 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 LIPNQ5VXI9 398 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 NSUN5P2Q63ZY6 315 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 YIPF7Q8N8F6 280 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 RBM24Q9BX46 236 aaKnown RBP17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 TTTY10Q9BZA0 68 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 MED29Q9NX70 200 aa17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 COA3Q9Y2R0 106 aaPredicted RBP17.52■□□□□ 0.39
CTDSP2-204ENST00000548823 DOCK7Q96N67 2140 aa17.51■□□□□ 0.39
CTDSP2-204ENST00000548823 ISPDA4D126 451 aa17.51■□□□□ 0.39
CTDSP2-204ENST00000548823 TMEM127O75204 238 aa17.51■□□□□ 0.39
CTDSP2-204ENST00000548823 ZNF432O94892 652 aa17.51■□□□□ 0.39
CTDSP2-204ENST00000548823 IGHG1P01857 330 aa17.51■□□□□ 0.39
CTDSP2-204ENST00000548823 PGA4P0DJD7 388 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms