RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 HIST2H3PS2Q5TEC6 136 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 GNPNAT1Q96EK6 184 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-209ENST00000545689 MRGPRX3Q96LB0 322 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 ISG20L2Q9H9L3 353 aaKnown RBP11.37□□□□□ -0.59
COL4A6-209ENST00000545689 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 SPTY2D1-AS1A0A0U1RR47 76 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 FITM1A5D6W6 292 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 SNCAP37840 140 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 AGERQ15109 404 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 CYSLTR2Q9NS75 346 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 B9D1Q9UPM9 204 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 IGHV3-20A0A0C4DH32 117 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 G3V3Y1 287 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 M0R135 149 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 PRSS23O95084 383 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 EPHA2P29317 976 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 PSMB3P49720 205 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 OR10A3P58181 314 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 CST9LP1Q5W188 147 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 SYT13Q7L8C5 426 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 TSLPQ969D9 159 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF799Q96GE5 643 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 SIGLEC11Q96RL6 698 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 OPA3Q9H6K4 179 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 ZMAT3Q9HA38 289 aaKnown RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 GPR173Q9NS66 373 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 ICMTO60725 284 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 RPS2P15880 293 aaKnown RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 PSMB6P28072 239 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 FAM185AQ8N0U4 392 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 BANF2Q9H503 90 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 ASH2LQ9UBL3 628 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 KLF13Q9Y2Y9 288 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 CISD3P0C7P0 127 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 DHODHQ02127 395 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 LYG2Q86SG7 212 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 CARFQ8N187 725 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 HMGCLL1Q8TB92 370 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 PATE1Q8WXA2 126 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 A0A1W2PPH5 198 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 OR4E1P0C645 316 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 SHBQ15464 509 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 SIRT6Q8N6T7 355 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 CCL4L1Q8NHW4 92 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 ZPBPQ9BS86 351 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 CACFD1Q9UGQ2 172 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 TPOP07202 933 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 ALOX5APP20292 161 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 SERPINF1P36955 418 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 SNTB1Q13884 538 aaKnown RBP11.36□□□□□ -0.59
COL4A6-209ENST00000545689 PRSS36Q5K4E3 855 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 TMEM71Q6P5X7 295 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 NAA40Q86UY6 237 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 OR10R2Q8NGX6 335 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 RNF150Q9ULK6 438 aa11.36□□□□□ -0.59
COL4A6-209ENST00000545689 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 MDFIC2A0A1B0GVS7 189 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 hCG_1809904A0A1W2PP81 198 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 A0A1W2PPE2 198 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 A0A1W2PR64 198 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 A0A1W2PRV1 198 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 NPIPB8E9PQR5 432 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 TNFSF12O43508 249 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 IGHA2P01877 340 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 MGMTP16455 207 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 RAG2P55895 527 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 AKR1C1Q04828 323 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 LIN37Q96GY3 246 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 THOC3Q96J01 351 aaKnown RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF2Q9BSG1 426 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 PLA2G12AQ9BZM1 189 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 C12orf10Q9HB07 376 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 GPR84Q9NQS5 396 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 ANKRD61A6NGH8 418 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 CLINT1Q14677 625 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 PHLDA2Q53GA4 152 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 OR2AK2Q8NG84 335 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 OR2AE1Q8NHA4 323 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 GPX8Q8TED1 209 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 SAMD10Q9BYL1 202 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 RBM38Q9H0Z9 239 aaKnown RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 HAO2Q9NYQ3 351 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 LRRC30A6NM36 301 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 SLC17A2O00624 439 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 HSD17B6O14756 317 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 HPNP05981 417 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 APEHP13798 732 aaKnown RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 THBS4P35443 961 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 PCK2Q16822 640 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 MFSD4AQ8N468 514 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 NOXO1Q8NFA2 376 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 OR13C5Q8NGS8 318 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 OR4Q3Q8NH05 313 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 EMC6Q9BV81 110 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms