RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 LPAR4Q99677 370 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 TUBA4BQ9H853 241 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 VCANP13611 3396 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 METTL21EPA6NDL7 271 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 TXNL1O43396 289 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 NDUFS6O75380 124 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 CLN5O75503 358 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 MED6O75586 246 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 PNMTP11086 282 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 HRH1P35367 487 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 EIF2S3P41091 472 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 DVL1P1P54792 670 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 ADPRHP54922 357 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 RPL18Q07020 188 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 KLHL26Q53HC5 615 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 ACER2Q5QJU3 275 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 OR52W1Q6IF63 320 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 CACUL1Q86Y37 369 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 JAGN1Q8N5M9 183 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 GVQW1Q8N7I0 195 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 SLC25A44Q96H78 314 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 KIRREL1Q96J84 757 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 RPS10P5Q9NQ39 176 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 DEC1Q9P2X7 70 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 COL4A2P08572 1712 aa16.69■□□□□ 0.26
SFSWAP-207ENST00000538548 C9JQL5 133 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 OR10H2O60403 315 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 OR8U8P0C7N1 319 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 SLC35E2P0CK97 266 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 RAB6AP20340 208 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 COL19A1Q14993 1142 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 AGBL4Q5VU57 503 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 C1orf53Q5VUE5 145 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 BTNL8Q6UX41 500 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 SLC35D2Q76EJ3 337 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 TAF8Q7Z7C8 310 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 PPP1R14AQ96A00 147 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 ANKRD9Q96BM1 317 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 G6PC3Q9BUM1 346 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 TMEM106CQ9BVX2 250 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 FN3KRPQ9HA64 309 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 FOXS1O43638 330 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 LRP3O75074 770 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 S1PR1P21453 382 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 PLPP4Q5VZY2 271 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 ALPK2Q86TB3 2170 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 OR51A2Q8NGJ7 313 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 SRMSQ9H3Y6 488 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 FANCMQ8IYD8 2048 aa16.68■□□□□ 0.26
SFSWAP-207ENST00000538548 WIPF3A6NGB9 483 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 RAB27BO00194 218 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 IFNA6P05013 189 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 TBPP20226 339 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 AKR1C3P42330 323 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 LSSP48449 732 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 C1orf100Q5SVJ3 147 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 KDF1Q8NAX2 398 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 FLVCR1-AS1Q8TAF5 88 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 AKR1E2Q96JD6 320 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 VSTM2LQ96N03 204 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 SLC5A7Q9GZV3 580 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 GDF2Q9UK05 429 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 TNFSF14O43557 240 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 GLP1RP43220 463 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 SLC22A6Q4U2R8 563 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 WBP2NLQ6ICG8 309 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 ATG4DQ86TL0 474 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 ZNF563Q8TA94 476 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 ZNF775Q96BV0 537 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 OCSTAMPQ9BR26 566 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 TMPRSS5Q9H3S3 457 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 ZDHHC4Q9NPG8 344 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 PARP11Q9NR21 331 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 OR5AC2Q9NZP5 309 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 LRIT1Q9P2V4 623 aa16.67■□□□□ 0.26
SFSWAP-207ENST00000538548 LOC390937A0A1W2PQ73 354 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 ZNF729A6NN14 1252 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 AGPAT2O15120 278 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 ST6GAL1P15907 406 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 SULT1A2P50226 295 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 SPOCK1Q08629 439 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 CCINQ13939 588 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 TMEM128Q5BJH2 165 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 ZNF440Q8IYI8 595 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 C7orf61Q8IZ16 206 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 WDSUB1Q8N9V3 476 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 OR4C3Q8NH37 302 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 NKD1Q969G9 470 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 CERS4Q9HA82 394 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 RAB18Q9NP72 206 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 DMRT1Q9Y5R6 373 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 SERPINA5P05154 406 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 ROM1Q03395 351 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 MFGE8Q08431 387 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 SLC18B1Q6NT16 456 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 NPSR1Q6W5P4 371 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 HOGA1Q86XE5 327 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 CA13Q8N1Q1 262 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 ROBO4Q8WZ75 1007 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 TAF9BQ9HBM6 251 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms