RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 COQ3Q9NZJ6 369 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 C5orf63A6NC05 138 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF878C9JN71 531 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC2A1P11166 492 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 CCL2P13500 99 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 APEX1P27695 318 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 GRNP28799 593 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 LIPAP38571 399 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 PRKXP51817 358 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 UBE2NP61088 152 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 PCBD1P61457 104 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 HGFACQ04756 655 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 DYNC1I2Q13409 638 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 SNTB1Q13884 538 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 RAB35Q15286 201 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 TSTQ16762 297 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ARMCX4Q5H9R4 360 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ALKBH2Q6NS38 261 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 KCTD18Q6PI47 426 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 SYT9Q86SS6 491 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 NAA40Q86UY6 237 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF75AQ96N20 296 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ATF6BQ99941 703 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 MROQ9BYG7 248 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ACTR6Q9GZN1 396 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 BRD7Q9NPI1 651 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 DDX28Q9NUL7 540 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 ST6GALNAC2Q9UJ37 374 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 CACNA1CQ13936 2221 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 HIVEP3Q5T1R4 2406 aa13.63□□□□□ -0.23
SFSWAP-206ENST00000537582 OR6C6A6NF89 314 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 OR5H1A6NKK0 313 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 SRSF10O75494 262 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 SULT1C4O75897 302 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 UBL3O95164 117 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 UGT2B10P36537 528 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 HTR5AP47898 357 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 RIDAP52758 137 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 GALK2Q01415 458 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 SSX1Q16384 188 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 GSG1Q2KHT4 349 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 FAM220AQ7Z4H9 259 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 OR1F12Q8NHA8 337 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 LILRB4Q8NHJ6 448 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 FCGR1BQ92637 280 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 BOD1Q96IK1 185 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 CEPT1Q9Y6K0 416 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 LOC100509620A0A075B734 347 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 ARPC4-TTLL3A0A0A6YYG9 625 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 F5H5K5 113 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 CRYGSP22914 178 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 ASCL1P50553 236 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 TAF13Q15543 124 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 LIPKQ5VXJ0 399 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 PRSS35Q8N3Z0 413 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 CA5BP1Q8WTZ4 195 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 HDHD2Q9H0R4 259 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 ELOVL5Q9NYP7 299 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC22A13Q9Y226 551 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 N6AMT1Q9Y5N5 214 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC25A15Q9Y619 301 aa13.62□□□□□ -0.23
SFSWAP-206ENST00000537582 HSD11B1P28845 292 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 ARR3P36575 388 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 TGFBR2P37173 567 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 KIR3DL2P43630 455 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 IDH3GP51553 393 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 GBX2P52951 348 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 MLLT11Q13015 90 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 TAB1Q15750 504 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 ODF4Q2M2E3 257 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC25A35Q3KQZ1 300 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 ARL9Q6T311 187 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 C17orf78Q8N4C9 275 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 PAQR4Q8N4S7 273 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 OR13F1Q8NGS4 319 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 ITLN2Q8WWU7 325 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 ASB5Q8WWX0 329 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 NANOS1Q8WY41 292 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 TRIM36Q9NQ86 728 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 FAM206AQ9NX38 181 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 FRRS1LQ9P0K9 344 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 GTF2A1LQ9UNN4 478 aa13.61□□□□□ -0.23
SFSWAP-206ENST00000537582 C16orf97H3BN30 126 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 H3BSH0 61 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF701M0R085 212 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF254O75437 659 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 TACSTD2P09758 323 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 RNF224P0DH78 156 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF14P17017 642 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 CELP19835 753 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 HOXC12P31275 282 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 CX3CR1P49238 355 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF121P58317 390 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC3A1Q07837 685 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 KRTAP27-1Q3LI81 207 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 WDR38Q5JTN6 314 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms