RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TMEM179BQ7Z7N9 219 aa19.59■□□□□ 0.73
CAPN1-222ENST00000532285 OR4Q3Q8NH05 313 aa19.59■□□□□ 0.73
CAPN1-222ENST00000532285 TEX47Q8TBZ9 253 aa19.59■□□□□ 0.73
CAPN1-222ENST00000532285 GTF3AQ92664 365 aaKnown RBP19.59■□□□□ 0.73
CAPN1-222ENST00000532285 YIPF5Q969M3 257 aa19.59■□□□□ 0.73
CAPN1-222ENST00000532285 DECR2Q9NUI1 292 aa19.59■□□□□ 0.73
CAPN1-222ENST00000532285 PDP1Q9P0J1 537 aaPredicted RBP19.59■□□□□ 0.73
CAPN1-222ENST00000532285 IFNGP01579 166 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 DBHP09172 617 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 ZNF823P16415 610 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 PYCR1P32322 319 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 GGT2P36268 569 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 ECH1Q13011 328 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 PSG7Q13046 419 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 FAM209AQ5JX71 171 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 LINC00346Q8IVM7 164 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 OR5L1Q8NGL2 311 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 PITX2Q99697 317 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 RBM4Q9BWF3 364 aaKnown RBP19.58■□□□□ 0.72
CAPN1-222ENST00000532285 ZNF275Q9NSD4 429 aaPredicted RBP19.58■□□□□ 0.72
CAPN1-222ENST00000532285 MRPL22Q9NWU5 206 aaKnown RBP19.58■□□□□ 0.72
CAPN1-222ENST00000532285 DNAJB9Q9UBS3 223 aa19.58■□□□□ 0.72
CAPN1-222ENST00000532285 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.57■□□□□ 0.724e-7■□□□□ 8.2
CAPN1-222ENST00000532285 TPD52L2O43399 206 aaKnown RBP19.57■□□□□ 0.72
CAPN1-222ENST00000532285 TIMM8AO60220 97 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-222ENST00000532285 GPR6P46095 362 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-222ENST00000532285 CRMP1Q14194 572 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 TSTQ16762 297 aaKnown RBP19.57■□□□□ 0.72
CAPN1-222ENST00000532285 ZMAT1Q5H9K5 638 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 CFAP77Q6ZQR2 320 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 HPS1Q92902 700 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 PTP4A1Q93096 173 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 DIRC2Q96SL1 478 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 MMADHCQ9H3L0 296 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-222ENST00000532285 POFUT1Q9H488 388 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 ZNF556Q9HAH1 456 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 ZDHHC8Q9ULC8 765 aa19.57■□□□□ 0.72
CAPN1-222ENST00000532285 ANK3Q12955 4377 aaKnown RBP19.56■□□□□ 0.72
CAPN1-222ENST00000532285 LRP5LA4QPB2 252 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 RIIAD1A6NNX1 92 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 H3BN98 237 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 SPRY3O43610 288 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 RP2O75695 350 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 IGHV1-46P01743 117 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 ADH4P08319 380 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 ZNF16P17020 682 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-222ENST00000532285 KITLGP21583 273 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 CRYBB2P43320 205 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 SLC25A1P53007 311 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 OR9Q1Q8NGQ5 310 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 ZNRF4Q8WWF5 429 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 APOBEC3DQ96AK3 386 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-222ENST00000532285 SLCO4A1Q96BD0 722 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 HAVCR1Q96D42 359 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 CMBLQ96DG6 245 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 MSI2Q96DH6 328 aaKnown RBP19.56■□□□□ 0.72
CAPN1-222ENST00000532285 ATF6BQ99941 703 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 NMNAT2Q9BZQ4 307 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 SAP30LQ9HAJ7 183 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 CMC2Q9NRP2 79 aa19.56■□□□□ 0.72
CAPN1-222ENST00000532285 PURGQ9UJV8 347 aaKnown RBP19.56■□□□□ 0.72
CAPN1-222ENST00000532285 TANC2Q9HCD6 1990 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 IGHV1-69-2A0A0G2JMI3 117 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 ZSCAN5BA6NJL1 495 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 CDC14BO60729 498 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 ANXA8P13928 327 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 ZNF3P17036 446 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 FMO3P31513 532 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 GRK5P34947 590 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 ERFP50548 548 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 TRIP10Q15642 601 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 RSPO1Q2MKA7 263 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-222ENST00000532285 KRTAP27-1Q3LI81 207 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 FAM166AQ6J272 317 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 HIPK1Q86Z02 1210 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 OR51L1Q8NGJ5 315 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 EGLN1Q9GZT9 426 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 TMEM160Q9NX00 188 aa19.55■□□□□ 0.72
CAPN1-222ENST00000532285 ABCA2Q9BZC7 2435 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 LOC100289279A0A1B0GTE1 492 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 TVP23AA6NH52 213 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 PPIHO43447 177 aaKnown RBP19.54■□□□□ 0.72
CAPN1-222ENST00000532285 RAC2P15153 192 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 SPI1P17947 270 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 BLVRAP53004 296 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 CDK5R2Q13319 367 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 SLC27A4Q6P1M0 643 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 USP51Q70EK9 711 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 ELMOD3Q96FG2 381 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 MSL2Q9HCI7 577 aa19.54■□□□□ 0.72
CAPN1-222ENST00000532285 PNRC2Q9NPJ4 139 aaKnown RBP19.54■□□□□ 0.72
CAPN1-222ENST00000532285 LMX1BO60663 402 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 DEAF1O75398 565 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-222ENST00000532285 GYPBP06028 91 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 CD55P08174 381 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 OSMP13725 252 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 PRKACGP22612 351 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 POU1F1P28069 291 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 HFEQ30201 348 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 FBXW12Q6X9E4 464 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms