RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 OR51F2Q8NH61 342 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 OR4S2Q8NH73 311 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ITFG1Q8TB96 612 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ZNF596Q8TC21 504 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 RNF138Q8WVD3 245 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 PIH1D2Q8WWB5 315 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 RDH5Q92781 318 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 TMEM230Q96A57 120 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ISOC2Q96AB3 205 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 RPEQ96AT9 228 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 CREB3L1Q96BA8 519 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 MICU1Q9BPX6 476 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 HDHD3Q9BSH5 251 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 CALN1Q9BXU9 219 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 PATZ1Q9HBE1 687 aaKnown RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ADA2Q9NZK5 511 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 IFNKQ9P0W0 207 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ZNF282Q9UDV7 671 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ZMAT5Q9UDW3 170 aaKnown RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 FLVCR2Q9UPI3 526 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 KPTNQ9Y664 436 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 BZW2Q9Y6E2 419 aaKnown RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 KCNE3Q9Y6H6 103 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 EIF4G1Q04637 1599 aaKnown RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 LRP4O75096 1905 aa2.23□□□□□ -2.05
BRCA2-203ENST00000528762 MTCL1Q9Y4B5 1905 aaKnown RBP2.23□□□□□ -2.05
BRCA2-203ENST00000528762 ATRXP46100 2492 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 LOC100506127A0A0U1RQW1 187 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 A6NDX4 124 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 KLLNB2CW77 178 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 PSMD11O00231 422 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 PLPP1O14494 284 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 NVLO15381 856 aaKnown RBP2.22□□□□□ -2.05
BRCA2-203ENST00000528762 RAD51CO43502 376 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 SLC25A27O95847 323 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 NPPAP01160 153 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 IGLV2-23P01705 113 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 FABP3P05413 133 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 HOXC4P09017 264 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-203ENST00000528762 CCL2P13500 99 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 ATF6P18850 670 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 OMGP23515 440 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 CCNE1P24864 410 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 LCN1P31025 176 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 MAS1LP35410 378 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 CYB561P49447 251 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 SERPINB8P50452 374 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 YWHAEP62258 255 aaKnown RBP2.22□□□□□ -2.05
BRCA2-203ENST00000528762 STK38Q15208 465 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 RSPO1Q2MKA7 263 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-203ENST00000528762 Q3ZCU0 254 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 SLC35D2Q76EJ3 337 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 ARRDC1Q8N5I2 433 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 ASCC1Q8N9N2 400 aaKnown RBP2.22□□□□□ -2.05
BRCA2-203ENST00000528762 Q8N9W7 124 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 OR6Q1Q8NGQ2 317 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 NDNFQ8TB73 568 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 APH1BQ8WW43 257 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 BAALCQ8WXS3 180 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 ELSPBP1Q96BH3 223 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 APH1AQ96BI3 265 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 MSANTD3Q96H12 275 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 WFIKKN1Q96NZ8 548 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 MAP1LC3CQ9BXW4 147 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 TM6SF2Q9BZW4 377 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 NAA50Q9GZZ1 169 aaKnown RBP2.22□□□□□ -2.05
BRCA2-203ENST00000528762 CHRNA10Q9GZZ6 450 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 IFI27L2Q9H2X8 130 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 MCUBQ9NWR8 336 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 CD84Q9UIB8 345 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 TP53TG3Q9ULZ0 132 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 STK38LQ9Y2H1 464 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 FHOD3Q2V2M9 1422 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 CARMIL3Q8ND23 1372 aa2.22□□□□□ -2.05
BRCA2-203ENST00000528762 IGLV11-55A0A075B6I3 123 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 PLAC8L1A1L4L8 177 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 FAM166BA8MTA8 275 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 TRIM49D1C9J1S8 452 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 NME4O00746 187 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 YKT6O15498 198 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 CDC40O60508 579 aaKnown RBP eCLIP2.21□□□□□ -2.06
BRCA2-203ENST00000528762 SS18L1O75177 396 aaPredicted RBP2.21□□□□□ -2.06
BRCA2-203ENST00000528762 VAPBO95292 243 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 LCA5LO95447 670 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 TDP2O95551 362 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 ETHE1O95571 254 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 HPRT1P00492 218 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 EIF4EP06730 217 aaKnown RBP2.21□□□□□ -2.06
BRCA2-203ENST00000528762 HOXB8P17481 243 aaPredicted RBP2.21□□□□□ -2.06
BRCA2-203ENST00000528762 GABRG2P18507 467 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 ELK1P19419 428 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 CSNK2A2P19784 350 aaPredicted RBP2.21□□□□□ -2.06
BRCA2-203ENST00000528762 CEACAM3P40198 252 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 FABP6P51161 128 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 ZNF138P52744 262 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 CRISP3P54108 245 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 ZNF121P58317 390 aaPredicted RBP2.21□□□□□ -2.06
BRCA2-203ENST00000528762 SLC7A9P82251 487 aa2.21□□□□□ -2.06
BRCA2-203ENST00000528762 DMTNQ08495 405 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms