RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SPRY3O43610 288 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 TIMM8AO60220 97 aaPredicted RBP28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 CDC14BO60729 498 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 DNAL1Q4LDG9 190 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 SLC35F1Q5T1Q4 408 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 LNX2Q8N448 690 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 OR8D4Q8NGM9 314 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 PURGQ9UJV8 347 aaKnown RBP28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 BAIAP2Q9UQB8 552 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 STARD10Q9Y365 291 aa28.09■■■□□ 2.09
SSSCA1-205ENST00000527920 HNF1AP20823 631 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 FAM120AOSQ5T036 256 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 SLC18B1Q6NT16 456 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 CD300LDQ6UXZ3 194 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 ZSCAN2Q7Z7L9 614 aaPredicted RBP28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 ADGRG5Q8IZF4 528 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 HAVCR1Q96D42 359 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 POFUT1Q9H488 388 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 CYB5R1Q9UHQ9 305 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 U3KQV3 271 aa28.08■■■□□ 2.09
SSSCA1-205ENST00000527920 ARRDC5A6NEK1 342 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 B4DSR2 109 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 RAC2P15153 192 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 PPP1R8Q12972 351 aaKnown RBP28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 ECH1Q13011 328 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 CDK5R2Q13319 367 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 CCNIQ14094 377 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 HFEQ30201 348 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 KRTAP27-1Q3LI81 207 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 ZNF362Q5T0B9 420 aaPredicted RBP28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 CORO6Q6QEF8 472 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 OR5L1Q8NGL2 311 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 OR2T4Q8NH00 348 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 PTP4A1Q93096 173 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 APOBEC3DQ96AK3 386 aaPredicted RBP28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 CHID1Q9BWS9 393 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 FN3KQ9H479 309 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 TBC1D23Q9NUY8 699 aa28.07■■■□□ 2.08
SSSCA1-205ENST00000527920 UBOX5O94941 541 aa28.06■■■□□ 2.08
SSSCA1-205ENST00000527920 DBHP09172 617 aa28.06■■■□□ 2.08
SSSCA1-205ENST00000527920 GGT2P36268 569 aa28.06■■■□□ 2.08
SSSCA1-205ENST00000527920 FBXW12Q6X9E4 464 aa28.06■■■□□ 2.08
SSSCA1-205ENST00000527920 CMBLQ96DG6 245 aa28.06■■■□□ 2.08
SSSCA1-205ENST00000527920 CLDN25C9JDP6 229 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 GYG2O15488 501 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 THBS2P35442 1172 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 DVL1P1P54792 670 aaPredicted RBP28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 OR2T33Q8NG76 320 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 CDADC1Q9BWV3 514 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 TSSK6Q9BXA6 273 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 MSL2Q9HCI7 577 aa28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 MRPL22Q9NWU5 206 aaKnown RBP28.05■■■□□ 2.08
SSSCA1-205ENST00000527920 DHRS12A0PJE2 317 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 HLA-DQA2P01906 255 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 PCMT1P22061 227 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 LMO4P61968 165 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 SLC3A1Q07837 685 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 CFAP77Q6ZQR2 320 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 COLCA1Q6ZS62 124 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 CYB561A3Q8NBI2 242 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 OR10G2Q8NGC3 310 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 OR2AJ1Q8NGZ0 328 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 TIMD4Q96H15 378 aa28.04■■■□□ 2.08
SSSCA1-205ENST00000527920 WNT9BO14905 357 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 CST1P01037 141 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 DBPQ10586 325 aaPredicted RBP28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 RSPO1Q2MKA7 263 aaPredicted RBP28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 CR1LQ2VPA4 569 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 LINC00346Q8IVM7 164 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 SLC37A3Q8NCC5 494 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 PROKR2Q8NFJ6 384 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 CANT1Q8WVQ1 401 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 SLC7A6OSQ96CW6 309 aaPredicted RBP28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 PITX2Q99697 317 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 ATF6BQ99941 703 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 RBM4Q9BWF3 364 aaKnown RBP28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 NARFLQ9H6Q4 476 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 CACNG2Q9Y698 323 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 COL6A5A8TX70 2615 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 SVEP1Q4LDE5 3571 aa28.03■■■□□ 2.08
SSSCA1-205ENST00000527920 SRD5A1P18405 259 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 TNFSF4P23510 183 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 TNFAIP6P98066 277 aaPredicted RBP28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 GIPC3Q8TF64 312 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 RAB1CQ92928 201 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 C1QTNF5Q9BXJ0 243 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 NMNAT2Q9BZQ4 307 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 PNRC2Q9NPJ4 139 aaKnown RBP28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 TREM2Q9NZC2 230 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 WIPI2Q9Y4P8 454 aa28.02■■■□□ 2.08
SSSCA1-205ENST00000527920 SOX14O95416 240 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 ZNF823P16415 610 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 SLC25A1P53007 311 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 Q6ZR03 302 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 OR4Q3Q8NH05 313 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 MDFIQ99750 246 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 ARMC1Q9NVT9 282 aa28.01■■■□□ 2.07
SSSCA1-205ENST00000527920 PYCR1P32322 319 aa28■■■□□ 2.07
SSSCA1-205ENST00000527920 CRMP1Q14194 572 aa28■■■□□ 2.07
SSSCA1-205ENST00000527920 FLOT2Q14254 428 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms