RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR2AJ1Q8NGZ0 328 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 NRBF2Q96F24 287 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 DCLRE1CQ96SD1 692 aaKnown RBP17.63■□□□□ 0.41
TRIM35-203ENST00000521253 BPESC1Q9GZL8 116 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 KCNG2Q9UJ96 466 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 STARD10Q9Y365 291 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 ABCA1O95477 2261 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 NAV3Q8IVL0 2385 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 CIB2O75838 187 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 MT-ND5P03915 603 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 RPS27P42677 84 aaKnown RBP17.62■□□□□ 0.41
TRIM35-203ENST00000521253 MMP15P51511 669 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 GGTLC2Q14390 218 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 ATP6AP1Q15904 470 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 RSPO1Q2MKA7 263 aaPredicted RBP17.62■□□□□ 0.41
TRIM35-203ENST00000521253 TMEM249Q2WGJ8 235 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 ZNF540Q8NDQ6 660 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 MAP6Q96JE9 813 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 PITX2Q99697 317 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 WDR76Q9H967 626 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 PNRC2Q9NPJ4 139 aaKnown RBP17.62■□□□□ 0.41
TRIM35-203ENST00000521253 AP4S1Q9Y587 144 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 COMMD3-BMI1R4GMX3 469 aa17.62■□□□□ 0.41
TRIM35-203ENST00000521253 IGHV4-61A0A0C4DH41 118 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 FAM183AA6NL82 134 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 PSKH1P11801 424 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 TUBG1P23258 451 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 COL8A2P25067 703 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 CCL8P80075 99 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 PSG7Q13046 419 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 RIN1Q13671 783 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 PCGF3Q3KNV8 242 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 KRTAP27-1Q3LI81 207 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 ZNF511Q8NB15 262 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 DUS3LQ96G46 650 aaKnown RBP17.61■□□□□ 0.41
TRIM35-203ENST00000521253 ATF6BQ99941 703 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 HCAR1Q9BXC0 346 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 MED20Q9H944 212 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 TUBG2Q9NRH3 451 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 KIF17Q9P2E2 1029 aa17.61■□□□□ 0.41
TRIM35-203ENST00000521253 PLSCR5A0PG75 271 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 CD5LO43866 347 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 HOXB4P17483 251 aaPredicted RBP17.6■□□□□ 0.41
TRIM35-203ENST00000521253 FASP25445 335 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 FMO3P31513 532 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 RGS6P49758 472 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 ZNF81P51508 661 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 CDK5Q00535 292 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 ECH1Q13011 328 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 LINC01590Q5TEZ4 76 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 FAHD1Q6P587 224 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 OR6K6Q8NGW6 343 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 OR5K1Q8NHB7 308 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 RDH5Q92781 318 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 YIPF5Q969M3 257 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 COG8Q96MW5 612 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 NKIRAS2Q9NYR9 191 aa17.6■□□□□ 0.41
TRIM35-203ENST00000521253 SONP18583 2426 aaKnown RBP17.6■□□□□ 0.41
TRIM35-203ENST00000521253 ZSCAN5BA6NJL1 495 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 INAFM1C9JVW0 142 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 F5H5K5 113 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 J3QW42 95 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 SPRY3O43610 288 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 TIMM8AO60220 97 aaPredicted RBP17.59■□□□□ 0.41
TRIM35-203ENST00000521253 IGHV1-46P01743 117 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 ENTPD1P49961 510 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 DAPP51397 102 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 MRPS11P82912 194 aaKnown RBP17.59■□□□□ 0.41
TRIM35-203ENST00000521253 OR10S1Q8NGN2 331 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 DNAJC9Q8WXX5 260 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 PTP4A1Q93096 173 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 APOBEC3DQ96AK3 386 aaPredicted RBP17.59■□□□□ 0.41
TRIM35-203ENST00000521253 OTULINQ96BN8 352 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 CMBLQ96DG6 245 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 CHODLQ9H9P2 273 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 PAPOLBQ9NRJ5 636 aaKnown RBP17.59■□□□□ 0.41
TRIM35-203ENST00000521253 CYSLTR2Q9NS75 346 aa17.59■□□□□ 0.41
TRIM35-203ENST00000521253 PURGQ9UJV8 347 aaKnown RBP17.59■□□□□ 0.41
TRIM35-203ENST00000521253 ZNF593O00488 134 aaPredicted RBP17.58■□□□□ 0.4
TRIM35-203ENST00000521253 SURF4O15260 269 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 HMGN1P05114 100 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 SPARCP09486 303 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 ACSM4P0C7M7 580 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 ACHEP22303 614 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 LIPAP38571 399 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 BLVRAP53004 296 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 HLXQ14774 488 aaPredicted RBP17.58■□□□□ 0.4
TRIM35-203ENST00000521253 TSTQ16762 297 aaKnown RBP17.58■□□□□ 0.4
TRIM35-203ENST00000521253 PCK2Q16822 640 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 TMEM236Q5W0B7 351 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 DCXRQ7Z4W1 244 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 AMIGO2Q86SJ2 522 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 HIPK1Q86Z02 1210 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 OR5L1Q8NGL2 311 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 LRTOMTQ8WZ04 291 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 MSL2Q9HCI7 577 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 PTTG3PQ9NZH4 202 aa17.58■□□□□ 0.4
TRIM35-203ENST00000521253 CGGBP1Q9UFW8 167 aaPredicted RBP17.58■□□□□ 0.4
TRIM35-203ENST00000521253 CHD3Q12873 2000 aaKnown RBP17.57■□□□□ 0.4
TRIM35-203ENST00000521253 G3V2T6 193 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms