RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 UTS2O95399 124 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 IGKV1D-16P01601 117 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 KLK1P06870 262 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 RBMY1DP0C7P1 496 aaKnown RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 CECR9P0C854 216 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 PPIAL4FP0DN26 164 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 SERPINB1P30740 379 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 GP5P40197 560 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 PSPHP78330 225 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 MRPS11P82912 194 aaKnown RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 FOXF1Q12946 379 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 ZNF154Q13106 437 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 CUL3Q13618 768 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 TRIP13Q15645 432 aaPredicted RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 STX1AQ16623 288 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 ARMC3Q5W041 872 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 CCDC89Q8N998 374 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 GATSQ8NAP1 163 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 OR7G2Q8NG99 324 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 OR4F15Q8NGB8 312 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 C11orf45Q8TAV5 145 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 ZFP90Q8TF47 636 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 RAB39BQ96DA2 213 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 ANKRD27Q96NW4 1050 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 CENPKQ9BS16 269 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 ZNF416Q9BWM5 594 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 TBL1XR1Q9BZK7 514 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 MARCH7Q9H992 704 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 CRNNQ9UBG3 495 aaPredicted RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 GRID1Q9ULK0 1009 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 NOSIPQ9Y314 301 aaKnown RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 U3KQK5 164 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 FRAS1Q86XX4 4008 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 ARHGAP32A7KAX9 2087 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 OR6C65A6NJZ3 312 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 TRAF3IP2O43734 574 aaPredicted RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 MRPL33O75394 65 aaKnown RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 FOLR2P14207 255 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 GABRB1P18505 474 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 ALDH3B1P43353 468 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 MAGEB1P43366 347 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 ZNF41P51814 821 aaPredicted RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 HERV-K104P61576 105 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 CDK16Q00536 496 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 PDK3Q15120 406 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 TOMM34Q15785 309 aaPredicted RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 FAM98BQ52LJ0 330 aaKnown RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 DMRTC1Q5HYR2 192 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 C1QTNF12Q5T7M4 302 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 TSPO2Q5TGU0 170 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 SULT1C3Q6IMI6 304 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 ZNF620Q6ZNG0 422 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 IKBIPQ70UQ0 350 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 LRP11Q86VZ4 500 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 NUDT13Q86X67 352 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 ZSCAN4Q8NAM6 433 aaPredicted RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 OR52E2Q8NGJ4 325 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 OR9A2Q8NGT5 310 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 ZNF675Q8TD23 568 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 TM4SF18Q96CE8 201 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 SH3YL1Q96HL8 342 aaPredicted RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 KCNS3Q9BQ31 491 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 MRPL37Q9BZE1 423 aaKnown RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 CNOT10Q9H9A5 744 aaKnown RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 ABCB10Q9NRK6 738 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 SEC14L4Q9UDX3 406 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 PURGQ9UJV8 347 aaKnown RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 PACSIN2Q9UNF0 486 aaPredicted RBP4.86□□□□□ -1.63
USP53-206ENST00000510737 WIPI2Q9Y4P8 454 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 INSIG2Q9Y5U4 225 aa4.86□□□□□ -1.63
USP53-206ENST00000510737 GJE1A6NN92 205 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 PHOX2AO14813 284 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 PLOD3O60568 738 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 BCL3P20749 454 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 ELK4P28324 431 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 CD80P33681 288 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 EIF1P41567 113 aaKnown RBP4.85□□□□□ -1.63
USP53-206ENST00000510737 RAD52P43351 418 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 EVX1P49640 407 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 UBASH3AP57075 661 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 MAD2L1BPQ15013 274 aaPredicted RBP4.85□□□□□ -1.63
USP53-206ENST00000510737 FAM45BPQ6NSW5 357 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 FRA10AC1Q70Z53 315 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 PXKQ7Z7A4 578 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 ADAMTSL2Q86TH1 951 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 TCAIMQ8N3R3 496 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 OR5M8Q8NGP6 311 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 OR2AJ1Q8NGZ0 328 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 MUC7Q8TAX7 377 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 FAM45AQ8TCE6 357 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 PHLDA1Q8WV24 401 aaPredicted RBP4.85□□□□□ -1.63
USP53-206ENST00000510737 RAB8BQ92930 207 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 ERP27Q96DN0 273 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 BPIFA3Q9BQP9 254 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 C16orf95Q9H693 158 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 TAS2R9Q9NYW1 312 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 MYEF2Q9P2K5 600 aaKnown RBP4.85□□□□□ -1.63
USP53-206ENST00000510737 CACNG2Q9Y698 323 aa4.85□□□□□ -1.63
USP53-206ENST00000510737 ZNF780BQ9Y6R6 833 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms