RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FNDC8Q8TC99 324 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 TMIGD2Q96BF3 282 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 MRI1Q9BV20 369 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 SSBP3Q9BWW4 388 aaPredicted RBP13.27□□□□□ -0.29
RAB40C-202ENST00000509637 ASH2LQ9UBL3 628 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 IL20RAQ9UHF4 553 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 VWFP04275 2813 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 KIR2DS1A0A191URI9 304 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 A0A1B0GWJ7 208 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 C5orf63A6NC05 138 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 GMNCA6NCL1 334 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 POM121CA8CG34 1229 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 C22orf46C9J442 243 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
RAB40C-202ENST00000509637 HLA-DPB1P04440 258 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 CDKN2AP42771 156 aaKnown RBP13.26□□□□□ -0.29
RAB40C-202ENST00000509637 SCRN3Q0VDG4 424 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 MAB21L1Q13394 359 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 TRAM2Q15035 370 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 ZBED5Q49AG3 693 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 RUSC1-AS1Q66K80 236 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 MOGAT3Q86VF5 341 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 SLC15A3Q8IY34 581 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 FITM2Q8N6M3 262 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 KIR3DL3Q8N743 410 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 OR8G5Q8NG78 346 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 ACOT11Q8WXI4 607 aaPredicted RBP13.26□□□□□ -0.29
RAB40C-202ENST00000509637 SLC30A2Q9BRI3 323 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 SLITRK2Q9H156 845 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 SYT4Q9H2B2 425 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 SIGLEC7Q9Y286 467 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 LRCH1Q9Y2L9 728 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 LHFPL6Q9Y693 200 aa13.26□□□□□ -0.29
RAB40C-202ENST00000509637 FAM181BA6NEQ2 426 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 SLC16A7O60669 478 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 PPIAL4GP0DN37 164 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 NR2C1P13056 603 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 TNFSF4P23510 183 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 KCNMB1Q16558 191 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 KRTAP27-1Q3LI81 207 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 ZNF404Q494X3 552 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 SLC27A4Q6P1M0 643 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 CORO6Q6QEF8 472 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 MBOAT2Q6ZWT7 520 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 PCYOX1LQ8NBM8 494 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 OR2T12Q8NG77 320 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 OR10S1Q8NGN2 331 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 SLC7A13Q8TCU3 470 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 SLC25A28Q96A46 364 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 SH3GL1Q99961 368 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 FNDC11Q9BVV2 318 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 NUAK2Q9H093 628 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 RERGLQ9H628 205 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 ZMAT3Q9HA38 289 aaKnown RBP13.25□□□□□ -0.29
RAB40C-202ENST00000509637 NRIP3Q9NQ35 241 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 TNFRSF19Q9NS68 423 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 VSX1Q9NZR4 365 aaPredicted RBP13.25□□□□□ -0.29
RAB40C-202ENST00000509637 CTSZQ9UBR2 303 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 OR5V1Q9UGF6 321 aa13.25□□□□□ -0.29
RAB40C-202ENST00000509637 ELOVL7A1L3X0 281 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 TNFRSF13BO14836 293 aaPredicted RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 IFNA14P01570 189 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 RPS2P15880 293 aaKnown RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 TUBG1P23258 451 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 RPL4P36578 427 aaKnown RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 FGF12P61328 243 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 LSM6P62312 80 aaKnown RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 GUCY1A3Q02108 690 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 AQP6Q13520 282 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 KRR1Q13601 381 aaKnown RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 SEC23BQ15437 767 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 MPPED2Q15777 294 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 MIDNQ504T8 468 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 WDR25Q64LD2 544 aaPredicted RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 ARL9Q6T311 187 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 ZNF730Q6ZMV8 503 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 SPATC1Q76KD6 591 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 RNF113BQ8IZP6 322 aaKnown RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 BHLHE23Q8NDY6 225 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 WFDC12Q8WWY7 111 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 FAM46AQ96IP4 442 aaKnown RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 ZNF570Q96NI8 536 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 WACQ9BTA9 647 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 MARCH7Q9H992 704 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 NMNAT1Q9HAN9 279 aaPredicted RBP13.24□□□□□ -0.29
RAB40C-202ENST00000509637 TUBG2Q9NRH3 451 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 C1RLQ9NZP8 487 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 GRHPRQ9UBQ7 328 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 MMP24Q9Y5R2 645 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 IER3IP1Q9Y5U9 82 aa13.24□□□□□ -0.29
RAB40C-202ENST00000509637 IQCF6A8MYZ5 107 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 SOCS2O14508 198 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 KHDRBS3O75525 346 aaKnown RBP13.23□□□□□ -0.29
RAB40C-202ENST00000509637 NPPAP01160 153 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 SFTPBP07988 381 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms