RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PPP1R3DO95685 299 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 ABHD16AO95870 558 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 DBHP09172 617 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 PCMT1P22061 227 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 LIPAP38571 399 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 ARHGDIAP52565 204 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 LSM6P62312 80 aaKnown RBP13.71□□□□□ -0.21
LMNA-222ENST00000508500 HIST1H3AP68431 136 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 AQP6Q13520 282 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 KCNMB1Q16558 191 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 MEP1BQ16820 701 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 HIST2H3PS2Q5TEC6 136 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 FAHD2BQ6P2I3 314 aaPredicted RBP13.71□□□□□ -0.21
LMNA-222ENST00000508500 DPY19L2P2Q6ZN68 376 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 HIST2H3AQ71DI3 136 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 SPATA24Q86W54 205 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 GLB1L2Q8IW92 636 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 CMBLQ96DG6 245 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 FAHD2AQ96GK7 314 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 CYSLTR2Q9NS75 346 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 ARMC1Q9NVT9 282 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 PLEK2Q9NYT0 353 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 CGGBP1Q9UFW8 167 aaPredicted RBP13.71□□□□□ -0.21
LMNA-222ENST00000508500 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 PURGQ9UJV8 347 aaKnown RBP13.71□□□□□ -0.21
LMNA-222ENST00000508500 ZDHHC8Q9ULC8 765 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 AURKCQ9UQB9 309 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 GRIP1Q9Y3R0 1128 aa13.71□□□□□ -0.21
LMNA-222ENST00000508500 LOC105371242A0A075B767 164 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 IGLV1-36A0A0B4J1U3 117 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 PNPP00491 289 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 KITLGP21583 273 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 RSPO1Q2MKA7 263 aaPredicted RBP13.7□□□□□ -0.22
LMNA-222ENST00000508500 LIPNQ5VXI9 398 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 SEMA6DQ8NFY4 1073 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 OR1F12Q8NHA8 337 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 RAB1CQ92928 201 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 YY1AP1Q9H869 796 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 LHFPL6Q9Y693 200 aa13.7□□□□□ -0.22
LMNA-222ENST00000508500 TIMM8AO60220 97 aaPredicted RBP13.69□□□□□ -0.22
LMNA-222ENST00000508500 KRT36O76013 467 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 FCGR1AP12314 374 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 ATP6V1B2P21281 511 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 TNFAIP6P98066 277 aaPredicted RBP13.69□□□□□ -0.22
LMNA-222ENST00000508500 SLC34A1Q06495 639 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 RCN1Q15293 331 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 RFX4Q33E94 735 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 C1orf94Q6P1W5 598 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 ARL9Q6T311 187 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 ADCK1Q86TW2 530 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 OR6V1Q8N148 313 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.69□□□□□ -0.22
LMNA-222ENST00000508500 PAPD5Q8NDF8 572 aaKnown RBP13.69□□□□□ -0.22
LMNA-222ENST00000508500 NPEPL1Q8NDH3 523 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 HAVCR1Q96D42 359 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 RAB39BQ96DA2 213 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 ERMAPQ96PL5 475 aaPredicted RBP13.69□□□□□ -0.22
LMNA-222ENST00000508500 DIRC2Q96SL1 478 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 EGLN1Q9GZT9 426 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 OR52D1Q9H346 318 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 OCEL1Q9H607 264 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 MAGIXQ9H6Y5 334 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 B9D1Q9UPM9 204 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 AP4S1Q9Y587 144 aa13.69□□□□□ -0.22
LMNA-222ENST00000508500 TCRBV5S2A0A599 114 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 DHRS12A0PJE2 317 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 GADD45GO95257 159 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 IGHV2-70P01814 119 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 ANPEPP15144 967 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 GSTM3P21266 225 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 ZFP36P26651 326 aaKnown RBP13.68□□□□□ -0.22
LMNA-222ENST00000508500 RPS6KA3P51812 740 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 SPIBQ01892 262 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 HLXQ14774 488 aaPredicted RBP13.68□□□□□ -0.22
LMNA-222ENST00000508500 CORO6Q6QEF8 472 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 CYP2R1Q6VVX0 501 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 OR2Z1Q8NG97 314 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 PTP4A1Q93096 173 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 TIMD4Q96H15 378 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 SIGLEC11Q96RL6 698 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 DCLRE1CQ96SD1 692 aaKnown RBP13.68□□□□□ -0.22
LMNA-222ENST00000508500 NMNAT3Q96T66 252 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 GAL3ST1Q99999 423 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 NDEL1Q9GZM8 345 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 SRA1Q9HD15 236 aaKnown RBP13.68□□□□□ -0.22
LMNA-222ENST00000508500 NPTNQ9Y639 398 aa13.68□□□□□ -0.22
LMNA-222ENST00000508500 ARPC3O15145 178 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 RGS9O75916 674 aaPredicted RBP13.67□□□□□ -0.22
LMNA-222ENST00000508500 HIST1H1CP16403 213 aaKnown RBP13.67□□□□□ -0.22
LMNA-222ENST00000508500 ADRA2CP18825 462 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 TUBG1P23258 451 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 RRM2P31350 389 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 GSSP48637 474 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 FAM98BQ52LJ0 330 aaKnown RBP13.67□□□□□ -0.22
LMNA-222ENST00000508500 LEG1Q6P5S2 330 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
LMNA-222ENST00000508500 ZNF283Q8N7M2 679 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 OR4K13Q8NH42 304 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 FANK1Q8TC84 345 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms