RNA–Protein interactions for RNA: ENST00000507836.1

CAST-219, Transcript of calpastatin, human

TSL 3

Gene CAST, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-219	ENST00000507836	ME2	P23368	584 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	U2AF2	P26368	475 aa	Known RBP eCLIP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	LOX	P28300	417 aa	Predicted RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	GPX4	P36969	197 aa	Predicted RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	NAA10	P41227	235 aa	Predicted RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	RAB9A	P51151	201 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	ACTR3	P61158	418 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	STXBP1	P61764	594 aa	Known RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	RPL23A	P62750	156 aa	Known RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	RBX1	P62877	108 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	CRADD	P78560	199 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	BAMBI	Q13145	260 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	DDX39B	Q13838	428 aa	Known RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	DGCR6	Q14129	220 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	DMC1	Q14565	340 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	OR7A5	Q15622	319 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	ZNF726P1	Q15940	193 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	KRTAP6-3	Q3LI67	103 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	TCEAL5	Q5H9L2	206 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	SLC8B1	Q6J4K2	584 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM150A	Q86TG1	271 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	CMTM1	Q8IZ96	169 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	CSGALNACT2	Q8N6G5	542 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM105	Q8N8V8	129 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	SNX31	Q8N9S9	440 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM104	Q8NE00	496 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	OR11H7	Q8NGC8	314 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	OR13C2	Q8NGS9	318 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	OR2A1	Q8NGT9	310 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	OR1P1	Q8NH06	330 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	OR51E1	Q8TCB6	317 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	GPR151	Q8TDV0	419 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	UBE2Q2	Q8WVN8	375 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	APH1B	Q8WW43	257 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	CAPSL	Q8WWF8	208 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	TCEAL3	Q969E4	200 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	NT5C3B	Q969T7	300 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	SLC25A46	Q96AG3	418 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	DNAJC1	Q96KC8	554 aa	Known RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	ZNF317	Q96PQ6	595 aa	Predicted RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	RBBP8	Q99708	897 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	RETN	Q9HD89	108 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	HRASLS2	Q9NWW9	162 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	UXT	Q9UBK9	157 aa	Predicted RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	DHCR7	Q9UBM7	475 aa	Known RBP	0.94	□□□□□ -2.26
CAST-219	ENST00000507836	MTFP1	Q9UDX5	166 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	TMCC3	Q9ULS5	477 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	KANK1	Q14678	1352 aa		0.94	□□□□□ -2.26
CAST-219	ENST00000507836	PTPRT	O14522	1441 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	IGKV1-8	A0A0C4DH67	115 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SMCO3	A2RU48	225 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SYCE1L	A8MT33	242 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	BTNL10	A8MVZ5	291 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SMKR1	H3BMG3	65 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	PLPP1	O14494	284 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	CLOCK	O15516	846 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	RNF13	O43567	381 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	CHST1	O43916	411 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	CNMD	O75829	334 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SLC22A5	O76082	557 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	IGLV3-25	P01717	112 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	ARG1	P05089	322 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SLC2A3	P11169	496 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	TGFBR1	P36897	503 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	GDI2	P50395	445 aa	Known RBP	0.93	□□□□□ -2.26
CAST-219	ENST00000507836	TAS2R46	P59540	309 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	RPS23	P62266	143 aa	Known RBP	0.93	□□□□□ -2.26
CAST-219	ENST00000507836	RPL23	P62829	140 aa	Known RBP	0.93	□□□□□ -2.26
CAST-219	ENST00000507836	ADARB1	P78563	741 aa	Known RBP	0.93	□□□□□ -2.26
CAST-219	ENST00000507836	IL15RA	Q13261	267 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	QPRT	Q15274	297 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	PSMD5	Q16401	504 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SPIN3	Q5JUX0	258 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	PRAMEF20	Q5VT98	475 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	UNQ9165/PRO28630	Q6UXU0	137 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	NANOGNB	Q7Z5D8	188 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	FAM228A	Q86W67	206 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	SLC22A9	Q8IVM8	553 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	FAM71A	Q8IYT1	594 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	CBR4	Q8N4T8	237 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	GATS	Q8NAP1	163 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	CHST4	Q8NCG5	386 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	NUBPL	Q8TB37	319 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM230	Q96A57	120 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	COL21A1	Q96P44	957 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	MARVELD1	Q9BSK0	173 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	GGTLC1	Q9BX51	225 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	TEKT3	Q9BXF9	490 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	C1orf198	Q9H425	327 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	ANKRA2	Q9H9E1	313 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM27	Q9HBJ8	222 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	C8orf17	Q9NRJ1	99 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	AGPAT4	Q9NRZ5	378 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	C21orf62	Q9NYP8	219 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	PTTG3P	Q9NZH4	202 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	PITPNC1	Q9UKF7	332 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	ASB3	Q9Y575	518 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	KCNE3	Q9Y6H6	103 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	NID2	Q14112	1375 aa		0.93	□□□□□ -2.26
CAST-219	ENST00000507836	USP47	Q96K76	1375 aa		0.93	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms