RNA–Protein interactions for RNA: ENST00000507836.1

CAST-219, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-219ENST00000507836 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
CAST-219ENST00000507836 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
CAST-219ENST00000507836 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
CAST-219ENST00000507836 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
CAST-219ENST00000507836 FOXD1Q16676 465 aa22.36■■□□□ 1.17
CAST-219ENST00000507836 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
CAST-219ENST00000507836 MSH5O43196 834 aa21.04■□□□□ 0.96
CAST-219ENST00000507836 PIAS4Q8N2W9 510 aaPredicted RBP20.82■□□□□ 0.92
CAST-219ENST00000507836 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
CAST-219ENST00000507836 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
CAST-219ENST00000507836 ADRA2BP18089 450 aa20.55■□□□□ 0.88
CAST-219ENST00000507836 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
CAST-219ENST00000507836 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
CAST-219ENST00000507836 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
CAST-219ENST00000507836 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
CAST-219ENST00000507836 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
CAST-219ENST00000507836 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
CAST-219ENST00000507836 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
CAST-219ENST00000507836 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
CAST-219ENST00000507836 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
CAST-219ENST00000507836 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
CAST-219ENST00000507836 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
CAST-219ENST00000507836 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
CAST-219ENST00000507836 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
CAST-219ENST00000507836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
CAST-219ENST00000507836 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
CAST-219ENST00000507836 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
CAST-219ENST00000507836 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
CAST-219ENST00000507836 CAPN15O75808 1086 aa16.7■□□□□ 0.26
CAST-219ENST00000507836 DSG3P32926 999 aa16.68■□□□□ 0.26
CAST-219ENST00000507836 POTEHQ6S545 545 aa16.53■□□□□ 0.24
CAST-219ENST00000507836 KCNA4P22459 653 aa16.49■□□□□ 0.23
CAST-219ENST00000507836 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
CAST-219ENST00000507836 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
CAST-219ENST00000507836 ABCB7O75027 752 aa16.3■□□□□ 0.2
CAST-219ENST00000507836 APLP2Q06481 763 aa16.29■□□□□ 0.2
CAST-219ENST00000507836 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
CAST-219ENST00000507836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
CAST-219ENST00000507836 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
CAST-219ENST00000507836 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
CAST-219ENST00000507836 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
CAST-219ENST00000507836 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
CAST-219ENST00000507836 POLA2Q14181 598 aa15.82■□□□□ 0.12
CAST-219ENST00000507836 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
CAST-219ENST00000507836 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
CAST-219ENST00000507836 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
CAST-219ENST00000507836 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
CAST-219ENST00000507836 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
CAST-219ENST00000507836 ZBTB12Q9Y330 459 aaPredicted RBP15.43■□□□□ 0.06
CAST-219ENST00000507836 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
CAST-219ENST00000507836 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
CAST-219ENST00000507836 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
CAST-219ENST00000507836 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
CAST-219ENST00000507836 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
CAST-219ENST00000507836 ZBTB22O15209 634 aa15.15■□□□□ 0.02
CAST-219ENST00000507836 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
CAST-219ENST00000507836 HAX1O00165 279 aa15.09■□□□□ 0.01
CAST-219ENST00000507836 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
CAST-219ENST00000507836 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
CAST-219ENST00000507836 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
CAST-219ENST00000507836 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
CAST-219ENST00000507836 FBLN2P98095 1184 aa14.91□□□□□ -0.02
CAST-219ENST00000507836 EVX2Q03828 476 aa14.9□□□□□ -0.02
CAST-219ENST00000507836 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
CAST-219ENST00000507836 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
CAST-219ENST00000507836 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
CAST-219ENST00000507836 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
CAST-219ENST00000507836 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
CAST-219ENST00000507836 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
CAST-219ENST00000507836 C19orf67A6NJJ6 358 aa14.64□□□□□ -0.07
CAST-219ENST00000507836 CHADLQ6NUI6 762 aa14.57□□□□□ -0.08
CAST-219ENST00000507836 GABBR2O75899 941 aa14.52□□□□□ -0.09
CAST-219ENST00000507836 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
CAST-219ENST00000507836 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
CAST-219ENST00000507836 LHX8Q68G74 356 aa14.37□□□□□ -0.11
CAST-219ENST00000507836 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
CAST-219ENST00000507836 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
CAST-219ENST00000507836 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
CAST-219ENST00000507836 CLCN6P51797 869 aa14.12□□□□□ -0.15
CAST-219ENST00000507836 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
CAST-219ENST00000507836 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
CAST-219ENST00000507836 DCBLD2Q96PD2 775 aa14.05□□□□□ -0.16
CAST-219ENST00000507836 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
CAST-219ENST00000507836 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
CAST-219ENST00000507836 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
CAST-219ENST00000507836 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
CAST-219ENST00000507836 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
CAST-219ENST00000507836 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
CAST-219ENST00000507836 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
CAST-219ENST00000507836 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
CAST-219ENST00000507836 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
CAST-219ENST00000507836 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
CAST-219ENST00000507836 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
CAST-219ENST00000507836 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
CAST-219ENST00000507836 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
CAST-219ENST00000507836 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
CAST-219ENST00000507836 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
CAST-219ENST00000507836 ASTLQ6HA08 431 aaPredicted RBP13.59□□□□□ -0.23
CAST-219ENST00000507836 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
CAST-219ENST00000507836 POTEMA6NI47 508 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms