RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 RAB23Q9ULC3 237 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RAB26Q9ULW5 256 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 AURKCQ9UQB9 309 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ENTPD4Q9Y227 616 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ANGPT4Q9Y264 503 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 C15orf41Q9Y2V0 281 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM32AQ9Y421 112 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PCYT1BQ9Y5K3 369 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ORC6Q9Y5N6 252 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OBSL1O75147 1896 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SZT2Q5T011 3432 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ALPK3Q96L96 1907 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 NUP205Q92621 2012 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CHD8Q9HCK8 2581 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 IGKV1-8A0A0C4DH67 115 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A0J9YVX5 310 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A1B0GTQ1 180 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TEX48A0A1B0GUV7 120 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 KRT87PA6NCN2 255 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC9B1P1A6NJY1 282 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 A8MUI8 341 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 C9JVG2 144 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 H0YGG7 62 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TMX2-CTNND1H3BSU7 103 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 M0QX08 132 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 HAT1O14929 419 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CASC3O15234 703 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CLOCKO15516 846 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 EMC8O43402 210 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DENRO43583 198 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 LCMT2O60294 686 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CTNSO60931 367 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SCN2BO60939 215 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 LRP3O75074 770 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF253O75346 499 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 E2F6O75461 281 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2B3O76000 313 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TNFAIP8O95379 198 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 NSA2O95478 260 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ETHE1O95571 254 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF682O95780 498 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 GPR75O95800 540 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 C6orf47O95873 294 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 AK1P00568 194 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 HPP00738 406 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SERPINA1P01009 418 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CST1P01037 141 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 FABP3P05413 133 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 GP1BAP07359 652 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 GUSBP08236 651 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TFPTP0C1Z6 253 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC35E2P0CK97 266 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SMIM10L1P0DMW3 83 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 RNH1P13489 461 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 GP9P14770 177 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ETS2P15036 469 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 MAGP20916 626 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 PSMB5P28074 263 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 PTPN6P29350 595 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 RRM2P31350 389 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 IFNGR2P38484 337 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DHPSP49366 369 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CCT3P49368 545 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 XKP51811 444 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 NCBP2P52298 156 aaKnown RBP eCLIP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SMSP52788 366 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CRISP3P54108 245 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SH3BGRP55822 239 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 HSD17B7P56937 341 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 VSX2P58304 361 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DSTNP60981 165 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 RAB8AP61006 207 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 HBA1P69905 142 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 HPCAP84074 193 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CDK6Q00534 326 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TNFRSF17Q02223 184 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CSTF1Q05048 431 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 STX4Q12846 297 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 IL18R1Q13478 541 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 C1orf61Q13536 156 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 EXOSC7Q15024 291 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 P2RY14Q15391 338 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNHIT3Q15649 155 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CEBPEQ15744 281 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ATP6AP1Q15904 470 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 LRRC36Q1X8D7 754 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TMEM44Q2T9K0 475 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DEFB133Q30KQ1 61 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DEFB134Q4QY38 66 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 NHLRC3Q5JS37 347 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TPRG1LQ5T0D9 272 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 OGFRL1Q5TC84 451 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 C1orf189Q5VU69 101 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 RNLSQ5VYX0 342 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TTC23Q5W5X9 447 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 RHBDD2Q6NTF9 364 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 IRGCQ6NXR0 463 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 IZUMO2Q6UXV1 221 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TMUB2Q71RG4 321 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CCDC80Q76M96 950 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms