RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 IL19Q9UHD0 177 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 J3QW42 95 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 PPP1R3DO95685 299 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 IGHV2-5P01817 119 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 HLA-DQA2P01906 255 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 GATA3P23771 443 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 FPR3P25089 353 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 RRM2P31350 389 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 HMGA2P52926 109 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 GYS2P54840 703 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 FXYD6P3P58550 94 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 ECH1Q13011 328 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 SLC36A3Q495N2 470 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 TMEM255AQ5JRV8 349 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 OTPQ5XKR4 325 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.12□□□□□ -0.79
MED28-203ENST00000503945 OR6V1Q8N148 313 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 KLHL36Q8N4N3 616 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 LINC00471Q8N535 108 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.12□□□□□ -0.79
MED28-203ENST00000503945 OR13G1Q8NGZ3 307 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 ZNF418Q8TF45 676 aaPredicted RBP10.12□□□□□ -0.79
MED28-203ENST00000503945 APOBEC3DQ96AK3 386 aaPredicted RBP10.12□□□□□ -0.79
MED28-203ENST00000503945 TSSK2Q96PF2 358 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 TMEM106BQ9NUM4 274 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 PPP1R3CQ9UQK1 317 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 NPTNQ9Y639 398 aa10.12□□□□□ -0.79
MED28-203ENST00000503945 B2RBV5 119 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 J3QLI3 93 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 DCTN6O00399 190 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 ARPC2O15144 300 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 DEAF1O75398 565 aaPredicted RBP10.11□□□□□ -0.79
MED28-203ENST00000503945 SEMG1P04279 462 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 DBHP09172 617 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 HIST1H1CP16403 213 aaKnown RBP10.11□□□□□ -0.79
MED28-203ENST00000503945 ZNF823P16415 610 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 CFPP27918 469 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 TSPAN31Q12999 210 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 HLXQ14774 488 aaPredicted RBP10.11□□□□□ -0.79
MED28-203ENST00000503945 MEP1BQ16820 701 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 DCAF12L2Q5VW00 463 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 C12orf54Q6X4T0 127 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 LRRC28Q86X40 367 aaPredicted RBP10.11□□□□□ -0.79
MED28-203ENST00000503945 ZDHHC21Q8IVQ6 265 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 OR52E2Q8NGJ4 325 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 NANPQ8TBE9 248 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 FANK1Q8TC84 345 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 NSL1Q96IY1 281 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 PITX2Q99697 317 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 COQ7Q99807 217 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 PLA2G12AQ9BZM1 189 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 HDHD2Q9H0R4 259 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 POFUT1Q9H488 388 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 RPRD1BQ9NQG5 326 aaKnown RBP10.11□□□□□ -0.79
MED28-203ENST00000503945 ATPIF1Q9UII2 106 aa10.11□□□□□ -0.79
MED28-203ENST00000503945 OR6C68A6NDL8 312 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 F5H5K5 113 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 TNFRSF11BO00300 401 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 WIPF1O43516 503 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 FOXH1O75593 365 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 VENTXO95231 258 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 GPANK1O95872 356 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 GSSP48637 474 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 HIST1H3AP68431 136 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 COX10Q12887 443 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 SPRNQ5BIV9 151 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 SLC35F1Q5T1Q4 408 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 HIST2H3PS2Q5TEC6 136 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 RPL13AP3Q6NVV1 102 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 CORO6Q6QEF8 472 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 FBXW12Q6X9E4 464 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 Q6ZR03 302 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 HIST2H3AQ71DI3 136 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 ZNF771Q7L3S4 317 aaPredicted RBP10.1□□□□□ -0.79
MED28-203ENST00000503945 ZBTB46Q86UZ6 589 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 OR5AS1Q8N127 324 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 SPICQ8N5J4 248 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 OR8G5Q8NG78 346 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 HCAR1Q9BXC0 346 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 TRIM15Q9C019 465 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 G6PC2Q9NQR9 355 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 PTTG3PQ9NZH4 202 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 LHFPL6Q9Y693 200 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 TENM1Q9UKZ4 2725 aa10.1□□□□□ -0.79
MED28-203ENST00000503945 LOC105371242A0A075B767 164 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 IGLV1-36A0A0B4J1U3 117 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 IFNL4K9M1U5 179 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 AVPP01185 164 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 GASTP01350 101 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 SELEP16581 610 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 FPR2P25090 351 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 SRP9P49458 86 aaKnown RBP10.09□□□□□ -0.79
MED28-203ENST00000503945 LCN2P80188 198 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.09□□□□□ -0.79
MED28-203ENST00000503945 MALLQ13021 153 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 RSPO1Q2MKA7 263 aaPredicted RBP10.09□□□□□ -0.79
MED28-203ENST00000503945 CLEC12AQ5QGZ9 265 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 OR2T2Q6IF00 324 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms