RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 FRRS1LQ9P0K9 344 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 CRNNQ9UBG3 495 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 NUFIP1Q9UHK0 495 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF391Q9UJN7 358 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 OR52A1Q9UKL2 312 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 FBXL3Q9UKT7 428 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 HHLA2Q9UM44 414 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 PROCRQ9UNN8 238 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF835Q9Y2P0 537 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 SPTBN4Q9H254 2564 aa7.14□□□□□ -1.27
TOPBP1-202ENST00000503338 TRBV5-5A0A0J9YX44 114 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 CASKO14936 926 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 DOK2O60496 412 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 SRSF10O75494 262 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 IL18BPO95998 194 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 UCHL1P09936 223 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OCM2P0CE71 109 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 ACHEP22303 614 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 PCSK6P29122 969 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 HOXC12P31275 282 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OTX1P32242 354 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OPRM1P35372 400 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 KIR2DL2P43627 348 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 TPTEP56180 551 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 NANOS3P60323 173 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 PLP2Q04941 152 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 DYNC1I2Q13409 638 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 P2RY6Q15077 328 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF404Q494X3 552 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 HSD17B12Q53GQ0 312 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 CCDC92Q53HC0 331 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 ZMAT1Q5H9K5 638 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 TMEM211Q6ICI0 200 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 TMEM91Q6ZNR0 172 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 BEND4Q6ZU67 534 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 SPATC1Q76KD6 591 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 LUZP2Q86TE4 346 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 ELMOD2Q8IZ81 293 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 C17orf78Q8N4C9 275 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF283Q8N7M2 679 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 CNEP1R1Q8N9A8 125 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 IL17RDQ8NFM7 739 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OR52H1Q8NGJ2 320 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OR10S1Q8NGN2 331 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OR1F12Q8NHA8 337 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC25A46Q96AG3 418 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 FBXO17Q96EF6 278 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF837Q96EG3 531 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 DCLRE1CQ96SD1 692 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 USB1Q9BQ65 265 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OR2H1Q9GZK4 316 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 PBOV1Q9GZY1 135 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 PIGMQ9H3S5 423 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 C12orf49Q9H741 205 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 RNF121Q9H920 327 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 OBP2BQ9NPH6 170 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 G6PC2Q9NQR9 355 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 LUZP4Q9P127 313 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 GTF2A1LQ9UNN4 478 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC5A6Q9Y289 635 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 CACNA1CQ13936 2221 aa7.13□□□□□ -1.27
TOPBP1-202ENST00000503338 DCHS1Q96JQ0 3298 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 A0A075B6Q4 140 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 A0A0U1RQV5 110 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 IQCMA0A1B0GVH7 501 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 A0A1B0GVI7 797 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ANKRD61A6NGH8 418 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 TTLL8A6PVC2 850 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 M0R135 149 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SYNGR3O43761 229 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC19A2O60779 497 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 MTRF1O75570 445 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 WISP2O76076 250 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 CDRT1O95170 752 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 PNPP00491 289 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 IGHV3-9P01782 118 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ITGA5P08648 1049 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 MMP7P09237 267 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF32P17041 273 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 COX5AP20674 150 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 CALRP27797 417 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 CEACAM8P31997 349 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 S100A5P33763 92 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SDC2P34741 201 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 RPS19P39019 145 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 KIR3DL2P43630 455 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 CX3CR1P49238 355 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 UBE2NP61088 152 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 RPS11P62280 158 aaKnown RBP eCLIP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SOWAHCQ53LP3 525 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 OTPQ5XKR4 325 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 PLXDC2Q6UX71 529 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SSX8Q7RTT4 187 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SKA3Q8IX90 412 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 GCNT2Q8N0V5 402 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 PRSS35Q8N3Z0 413 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ST6GALNAC3Q8NDV1 305 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 OR1K1Q8NGR3 316 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 MCFD2Q8NI22 146 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms