RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 PCGF3Q3KNV8 242 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 ELFN2Q5R3F8 820 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 SLC18B1Q6NT16 456 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 FAHD1Q6P587 224 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 HIPK1Q86Z02 1210 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 HS3ST5Q8IZT8 346 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 ZCCHC24Q8N2G6 241 aaKnown RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 ZNF786Q8N393 782 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 ATG16L2Q8NAA4 619 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 CYB561A3Q8NBI2 242 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 ICA1LQ8NDH6 482 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 OR5K1Q8NHB7 308 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 KLF14Q8TD94 323 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 TEX12Q9BXU0 123 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 FN3KQ9H479 309 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 GSX1Q9H4S2 264 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 CYSLTR2Q9NS75 346 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 MRPL22Q9NWU5 206 aaKnown RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 NKIRAS2Q9NYR9 191 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 TAAR3PQ9P1P4 343 aa10.59□□□□□ -0.71
MRPL55-233ENST00000495899 MYEF2Q9P2K5 600 aaKnown RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 CGGBP1Q9UFW8 167 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-233ENST00000495899 ACANP16112 2415 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 MTORP42345 2549 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 VWC2LB2RUY7 222 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 G3V2T6 193 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 LY6G6DO95868 133 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 NGFP01138 241 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 SPI1P17947 270 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 PAICSP22234 425 aaKnown RBP10.58□□□□□ -0.72
MRPL55-233ENST00000495899 GIFP27352 417 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 POU1F1P28069 291 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 FMO3P31513 532 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 ALDH3B1P43353 468 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 MRPS11P82912 194 aaKnown RBP10.58□□□□□ -0.72
MRPL55-233ENST00000495899 LOXL1Q08397 574 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-233ENST00000495899 GINS1Q14691 196 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 TEX30Q5JUR7 227 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 OTPQ5XKR4 325 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 TMEM154Q6P9G4 183 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 RFPL4BQ6ZWI9 263 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-233ENST00000495899 C10orf67Q8IYJ2 551 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 PARP8Q8N3A8 854 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 OR5L1Q8NGL2 311 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 SLC25A40Q8TBP6 338 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 UBASH3BQ8TF42 649 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 SNX33Q8WV41 574 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 SMR3AQ99954 134 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 PIMREGQ9BSJ6 248 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 BRD7Q9NPI1 651 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 PAPOLBQ9NRJ5 636 aaKnown RBP10.58□□□□□ -0.72
MRPL55-233ENST00000495899 GRIP1Q9Y3R0 1128 aa10.58□□□□□ -0.72
MRPL55-233ENST00000495899 MED13LQ71F56 2210 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 NF1P21359 2839 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 PLSCR5A0PG75 271 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 NAT2P11245 290 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 USF1P22415 310 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-233ENST00000495899 PYCR1P32322 319 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 NR4A2P43354 598 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 ACTR3P61158 418 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 TNP2Q05952 138 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 MAD2L1BPQ15013 274 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-233ENST00000495899 PCK2Q16822 640 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 KRTAP27-1Q3LI81 207 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 ACSM5Q6NUN0 579 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 CORO6Q6QEF8 472 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 ZDHHC13Q8IUH4 622 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 IQCF1Q8N6M8 205 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 OR9Q1Q8NGQ5 310 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 ZNRF4Q8WWF5 429 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 PTP4A1Q93096 173 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 APOBEC3DQ96AK3 386 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-233ENST00000495899 PITX2Q99697 317 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 ATF6BQ99941 703 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 TPK1Q9H3S4 243 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 STARD10Q9Y365 291 aa10.57□□□□□ -0.72
MRPL55-233ENST00000495899 NIPBLQ6KC79 2804 aaeCLIP10.56□□□□□ -0.72
MRPL55-233ENST00000495899 A0A096LNT2 108 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 SURF4O15260 269 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 ADH4P08319 380 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 MPV17P39210 176 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 DAPP51397 102 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 MMP15P51511 669 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 CRISP1P54107 249 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 ESRRGP62508 458 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 DBPQ10586 325 aaPredicted RBP10.56□□□□□ -0.72
MRPL55-233ENST00000495899 RSPO1Q2MKA7 263 aaPredicted RBP10.56□□□□□ -0.72
MRPL55-233ENST00000495899 ZMAT1Q5H9K5 638 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 FAM209AQ5JX71 171 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 CFAP77Q6ZQR2 320 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 COLCA1Q6ZS62 124 aa10.56□□□□□ -0.72
MRPL55-233ENST00000495899 LINC00346Q8IVM7 164 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms