RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 UBCP0CG48 685 aaKnown RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF12P17014 697 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF24P17028 368 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ATF1P18846 271 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 RAB3BP20337 219 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 S100A5P33763 92 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF84P51523 738 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CAV3P56539 151 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 GRB2P62993 217 aaKnown RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 PPP3R1P63098 170 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 FOXC1Q12948 553 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ECH1Q13011 328 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF79Q15937 498 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 HSD17B12Q53GQ0 312 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 DDI2Q5TDH0 399 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CARD17Q5XLA6 110 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 OR7E24Q6IFN5 339 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF544Q6NX49 715 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CORO6Q6QEF8 472 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 Q6ZNX1 250 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 COLCA1Q6ZS62 124 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 FGD2Q7Z6J4 655 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 LINC00346Q8IVM7 164 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 TUSC5Q8IXB3 177 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CDH26Q8IXH8 852 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 UBQLNLQ8IYU4 475 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 RDH10Q8IZV5 341 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CCDC54Q8NEL0 328 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 OR51A4Q8NGJ6 313 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SSC4DQ8WTU2 575 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CHPT1Q8WUD6 406 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 PPP1R14AQ96A00 147 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 GMPPAQ96IJ6 420 aaPredicted RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 CCDC32Q9BV29 185 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ULBP2Q9BZM5 246 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SRRQ9GZT4 340 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 COMMD4Q9H0A8 199 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 DEFB127Q9H1M4 99 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SLCO5A1Q9H2Y9 848 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SEC61A2Q9H9S3 476 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CALHM2Q9HA72 323 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CRLF2Q9HC73 371 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ABCB9Q9NP78 766 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 EMC7Q9NPA0 242 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 B3GAT2Q9NPZ5 323 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SLC7A10Q9NS82 523 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF275Q9NSD4 429 aaPredicted RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF224Q9NZL3 707 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF319Q9P2F9 582 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ASH2LQ9UBL3 628 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 MALT1Q9UDY8 824 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SPATA2Q9UM82 520 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SLC22A13Q9Y226 551 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 NOSIPQ9Y314 301 aaKnown RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 CMAHPQ9Y471 501 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 FRYQ5TBA9 3013 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ZNF407Q9C0G0 2248 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 TRAV8-7A0A075B6U6 113 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 A0A1W2PPL8 197 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MEGF11A6BM72 1044 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 IFITM5A6NNB3 132 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 DHRS7CA6NNS2 312 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 J3QRK9 145 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 K7EM74 188 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 PDCD5O14737 125 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SLC19A2O60779 497 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MRPL33O75394 65 aaKnown RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 UPK1BO75841 260 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 APOA1P02647 267 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 APOC1P02654 83 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 ACSM4P0C7M7 580 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 OCM2P0CE71 109 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 CALCBP10092 127 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 COX5BP10606 129 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 FCGR2AP12318 317 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SNRPBP14678 240 aaKnown RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 SPINK2P20155 84 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MYL9P24844 172 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 DDOSTP39656 456 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MNDAP41218 407 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 GUCA1AP43080 201 aaPredicted RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 MAGEB1P43366 347 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 OR3A2P47893 321 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 OR10A3P58181 314 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 PMP22Q01453 160 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MXD1Q05195 221 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 OXA1LQ15070 435 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 RAB35Q15286 201 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SGCAQ16586 387 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 TBR1Q16650 682 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 ZNF181Q2M3W8 571 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 CEACAM16Q2WEN9 425 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SLC25A35Q3KQZ1 300 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 PLEKHN1Q494U1 663 aaPredicted RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 ELFN2Q5R3F8 820 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MZT2AQ6P582 158 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 XKRXQ6PP77 449 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 DNM1P46Q6ZS02 220 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 DPPA2Q7Z7J5 298 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 LRRC28Q86X40 367 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms