RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CDH20Q9HBT6 801 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 MAN2C1Q9NTJ4 1040 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 ADA2Q9NZK5 511 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 SLC7A8Q9UHI5 535 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 TRAV27A0A087WT01 109 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 A0A1W2PPL8 197 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 SLC22A23A1A5C7 686 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 LRP5LA4QPB2 252 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 GMNCA6NCL1 334 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 NPIPB13A6NJU9 1138 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 NPIPB4C9JG80 1138 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 M0QYG6 137 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 SNX3O60493 162 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 LMX1BO60663 402 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 GMNNO75496 209 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 LCKP06239 509 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 MMP7P09237 267 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 NR2C1P13056 603 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 CCNOP22674 350 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 COL8A2P25067 703 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 APLNRP35414 380 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 GUCA1AP43080 201 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 RAD52P43351 418 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ZNF133P52736 654 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 UCP2P55851 309 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 SELENOVP59797 346 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 RPL27P61353 136 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 ERVS71-1P61550 626 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 MRPS34P82930 218 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 HSF2Q03933 536 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 MAD2L1BPQ15013 274 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 TAF11Q15544 211 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 TBC1D28Q2M2D7 210 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ALKBH6Q3KRA9 238 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ANKDD1AQ495B1 522 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 PABPC1L2AQ5JQF8 200 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 THEM4Q5T1C6 240 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 FAM27BQ5VT28 67 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 SLC25A47Q6Q0C1 308 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 TMPRSS11FQ6ZWK6 438 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 MBOAT2Q6ZWT7 520 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 USP51Q70EK9 711 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 TSEN54Q7Z6J9 526 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 CYP4Z1Q86W10 505 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 PAQR4Q8N4S7 273 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 RNF148Q8N7C7 305 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 CLDN22Q8N7P3 220 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 LRRC75AQ8NAA5 344 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ICA1LQ8NDH6 482 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 OR1J2Q8NGS2 313 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 OR13C2Q8NGS9 318 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 C11orf40Q8WZ69 217 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 NMD3Q96D46 503 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 MSI2Q96DH6 328 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 BEX2Q9BXY8 128 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 LRMDAQ9H2I8 198 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 C1orf198Q9H425 327 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 NMNAT1Q9HAN9 279 aaPredicted RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 CCNB1IP1Q9NPC3 277 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 SPAG4Q9NPE6 437 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 MYEF2Q9P2K5 600 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 ABCD2Q9UBJ2 740 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 RPS6KA6Q9UK32 745 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 FAM32AQ9Y421 112 aaKnown RBP6.91□□□□□ -1.3
RIF1-211ENST00000494333 UGT2A1Q9Y4X1 527 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ENPP4Q9Y6X5 453 aa6.91□□□□□ -1.3
RIF1-211ENST00000494333 ABCA1O95477 2261 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 ABCA2Q9BZC7 2435 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 TLN2Q9Y4G6 2542 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 A0A1W2PPW3 197 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 CDC42EP2O14613 210 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 SNAP29O95721 258 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 CLPTM1O96005 669 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 TGFAP01135 160 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 IFNA2P01563 188 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 IGHMP01871 453 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 ZNF23P17027 643 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 ZNF32P17041 273 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 DRD4P21917 467 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 STOMP27105 288 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 GIFP27352 417 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 LAP3P28838 519 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 PRDX6P30041 224 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 RPL4P36578 427 aaKnown RBP6.9□□□□□ -1.3
RIF1-211ENST00000494333 GPR4P46093 362 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 SLC9A3P48764 834 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 RPS7P62081 194 aaKnown RBP6.9□□□□□ -1.3
RIF1-211ENST00000494333 ERVK-25P63136 954 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 PSG4Q00888 419 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 DYRK1AQ13627 763 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 FHL1Q13642 323 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 CD300EQ496F6 205 aaPredicted RBP6.9□□□□□ -1.3
RIF1-211ENST00000494333 ZBED5Q49AG3 693 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 FAM166AQ6J272 317 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 PODNL1Q6PEZ8 512 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 Q6ZPA2 131 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 ARIH2OSQ8N7S6 290 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 AKR7LQ8NHP1 331 aa6.9□□□□□ -1.3
RIF1-211ENST00000494333 ZNF519Q8TB69 540 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms