RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MYBPC1Q00872 1141 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PSG4Q00888 419 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 NAAAQ02083 359 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 HSF2Q03933 536 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 HGFACQ04756 655 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 FMODQ06828 376 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 GSG1Q2KHT4 349 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 RSPO1Q2MKA7 263 aaPredicted RBP5.81□□□□□ -1.48
VPS52-219ENST00000493379 PGGHGQ32M88 737 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 KRTAP27-1Q3LI81 207 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC36A2Q495M3 483 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC36A3Q495N2 470 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC25A30Q5SVS4 291 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 LINC01590Q5TEZ4 76 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 ZNF544Q6NX49 715 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC27A4Q6P1M0 643 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 KLHL24Q6TFL4 600 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PAMR1Q6UXH9 720 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 ZNF704Q6ZNC4 412 aaPredicted RBP5.81□□□□□ -1.48
VPS52-219ENST00000493379 AMIGO2Q86SJ2 522 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 MDP1Q86V88 176 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 C1orf174Q8IYL3 243 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC37A3Q8NCC5 494 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC26A10Q8NG04 563 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 OR4F15Q8NGB8 312 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 OR52L1Q8NGH7 329 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PYDC1Q8WXC3 89 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PIK3IP1Q96FE7 263 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 ZC3HAV1LQ96H79 300 aaKnown RBP5.81□□□□□ -1.48
VPS52-219ENST00000493379 POM121L2Q96KW2 1035 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 NMNAT3Q96T66 252 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PKP2Q99959 881 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 IFT27Q9BW83 186 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 GABARAPL3Q9BY60 117 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SYT4Q9H2B2 425 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 C1orf198Q9H425 327 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 FN3KQ9H479 309 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 ZNF556Q9HAH1 456 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 NOX3Q9HBY0 568 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 ZNF701Q9NV72 531 aaPredicted RBP5.81□□□□□ -1.48
VPS52-219ENST00000493379 KCNG2Q9UJ96 466 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 KLHL21Q9UJP4 597 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 MOKQ9UQ07 419 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 RNF115Q9Y4L5 304 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 TIMM10BQ9Y5J6 103 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 RAI1Q7Z5J4 1906 aaPredicted RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 IGHV2OR16-5A0A0B4J2B6 119 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 A0A1W2PR80 420 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ZAR1LA6NP61 321 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 E7EQL1 145 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 SOCS2O14508 198 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ABCD4O14678 606 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 SURF4O15260 269 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 E2F6O75461 281 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 RENP00797 406 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 CRYAAP02489 173 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ALPLP05186 524 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 CELA3BP08861 270 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 CDH2P19022 906 aaPredicted RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 MSR1P21757 451 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 TUBG1P23258 451 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 CALCRP30988 508 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 CDAP32320 146 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 GGT2P36268 569 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 GUCA1AP43080 201 aaPredicted RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 EVX1P49640 407 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ERFP50548 548 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ZNF83P51522 516 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 GLO1Q04760 184 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS52-219ENST00000493379 CD47Q08722 323 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 NPRL3Q12980 569 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 TOP3AQ13472 1001 aaPredicted RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 GALEQ14376 348 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 GINS1Q14691 196 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 PTGES3Q15185 160 aaKnown RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 MST1LQ2TV78 715 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 SLX4IPQ5VYV7 408 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 C12orf73Q69YU5 71 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 C11orf71Q6IPW1 123 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 LEG1Q6P5S2 330 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 DNM1P34Q6PK57 102 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 COLCA1Q6ZS62 124 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 SLC16A14Q7RTX9 510 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 MYPOPQ86VE0 399 aaPredicted RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 LRRC75A-AS1Q8N1F1 130 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 PQLC1Q8N2U9 271 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 DTX3Q8N9I9 347 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 CPEB3Q8NE35 698 aaKnown RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 OR52E2Q8NGJ4 325 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 OR2T4Q8NH00 348 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 OR4K13Q8NH42 304 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ZNRF4Q8WWF5 429 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 IPCEF1Q8WWN9 437 aaPredicted RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 PIGTQ969N2 578 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 TSSK2Q96PF2 358 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 SH3GL3Q99963 347 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 DHRS9Q9BPW9 319 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 RBM4BQ9BQ04 359 aaKnown RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 ZNF416Q9BWM5 594 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms