RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 COMMD7Q86VX2 200 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 GRAMD2AQ8IUY3 354 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 CMIPQ8IY22 773 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 RNF113BQ8IZP6 322 aaKnown RBP8.34□□□□□ -1.07
BRCA1-219ENST00000491747 LNX2Q8N448 690 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 FNDC9Q8TBE3 224 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 HS6ST2Q96MM7 605 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 ZFP3Q96NJ6 502 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 ERMAPQ96PL5 475 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-219ENST00000491747 DPCDQ9BVM2 203 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-219ENST00000491747 C12orf10Q9HB07 376 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 CMC2Q9NRP2 79 aa8.34□□□□□ -1.07
BRCA1-219ENST00000491747 MRPS7Q9Y2R9 242 aaKnown RBP8.34□□□□□ -1.07
BRCA1-219ENST00000491747 ADGRG4Q8IZF6 3080 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TRAV1-2A0A0B4J238 106 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 RPS10-NUDT3A0A1W2PQS6 291 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SLC22A20A6NK97 555 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 BHLHE40O14503 412 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TMIGD3P0DMS9 266 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 CTSSP25774 331 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ACTC1P68032 377 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ACTA1P68133 377 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 POU4F3Q15319 338 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SLC25A35Q3KQZ1 300 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ACSM3Q53FZ2 586 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 CHMP1BQ7LBR1 199 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SLC51BQ86UW2 128 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 CDK20Q8IZL9 346 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 LSMEM1Q8N8F7 131 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ACBD4Q8NC06 268 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ST8SIA1Q92185 356 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 C4orf36Q96KX1 117 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 KLHL15Q96M94 604 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SRXN1Q9BYN0 137 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 MED20Q9H944 212 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 KCNJ16Q9NPI9 418 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 DLL4Q9NR61 685 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 RABL2AQ9UBK7 228 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 RABL2BQ9UNT1 228 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 MAB21L2Q9Y586 359 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ZC3H12DA2A288 527 aaKnown RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TRAPPC13A5PLN9 417 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 E9PI62 339 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 J3QLW9 94 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TNFSF13O75888 250 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ARL6IP5O75915 188 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 THBS1P07996 1170 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SBK2P0C263 348 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 RRASP10301 218 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF19P17023 458 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 KLK2P20151 261 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 CCR6P51684 374 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 DGCR2P98153 550 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SNTB1Q13884 538 aaKnown RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 SGCBQ16585 318 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ESPNLQ6ZVH7 1005 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ADGRG3Q86Y34 549 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 OR2T35Q8NGX2 323 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 OR2V1Q8NHB1 315 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF563Q8TA94 476 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 DNAJA3Q96EY1 480 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 PGLYRP3Q96LB9 341 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TEAD3Q99594 435 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 OR51V1Q9H2C8 321 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 RNF122Q9H9V4 155 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF629Q9UEG4 869 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-219ENST00000491747 CLEC4AQ9UMR7 237 aa8.33□□□□□ -1.08
BRCA1-219ENST00000491747 TUBAL3A6NHL2 446 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 RIIAD1A6NNX1 92 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 M0R233 179 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF593O00488 134 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 CTDSPLO15194 276 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 GSTZ1O43708 216 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PRAF2O60831 178 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PEX14O75381 377 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 IGFBP2P18065 325 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 SSTR2P30874 369 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ACVR1BP36896 505 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 MFSD13AQ14CX5 517 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 AANATQ16613 207 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 RNASE12Q5GAN4 147 aaKnown RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 FAM69AQ5T7M9 428 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 DMKNQ6E0U4 476 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 VWA1Q6PCB0 445 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 P4HA3Q7Z4N8 544 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 BEST4Q8NFU0 473 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 HAVCR2Q8TDQ0 301 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 TMEM239Q8WW34 195 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ROBO4Q8WZ75 1007 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 GHSRQ92847 366 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 IFT27Q9BW83 186 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 HCAR1Q9BXC0 346 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 GSX2Q9BZM3 304 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF436Q9C0F3 470 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ENKD1Q9H0I2 346 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 C20orf85Q9H1P6 137 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 CHST11Q9NPF2 352 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms