RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 NUBPLQ8TB37 319 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 CAPSLQ8WWF8 208 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 HSD17B10Q99714 261 aaKnown RBP2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 MTFP1Q9UDX5 166 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 PITPNC1Q9UKF7 332 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 AKNAQ7Z591 1439 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 SDK2Q58EX2 2172 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SCN4AP35499 1836 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SMCO3A2RU48 225 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 REM1O75628 298 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 H6PDO95479 791 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SERPINE2P07093 398 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 TROVE2P10155 538 aaKnown RBP eCLIP2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 ERGP11308 486 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 U2AF2P26368 475 aaKnown RBP eCLIP2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 PBLDP30039 288 aaPredicted RBP2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SLC1A1P43005 524 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 CCNG1P51959 295 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 CRISP1P54107 249 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 CDK5Q00535 292 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SP4Q02446 784 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 ZNF266Q14584 549 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 QPRTQ15274 297 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 MPV17L2Q567V2 206 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 AVPI1Q5T686 147 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SLC16A14Q7RTX9 510 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 CDH26Q8IXH8 852 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 IQCKQ8N0W5 287 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 GTPBP8Q8N3Z3 284 aaPredicted RBP2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 NPWQ8N729 165 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 OR4A4PQ8NGN8 299 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 TMEM230Q96A57 120 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 RETNQ9HD89 108 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
PRPF4B-207ENST00000490399 SVILO95425 2214 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 TRAV19A0A0A6YYK7 116 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 IGKV1-8A0A0C4DH67 115 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 LYRM9A8MSI8 78 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 K7EMT4 169 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 DNASE2O00115 360 aaPredicted RBP2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 CIB2O75838 187 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 HLA-DQB1P01920 261 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 ARG1P05089 322 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 CTSLP07711 333 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 RNASE2P10153 161 aaKnown RBP2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 CD37P11049 281 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 ATF6P18850 670 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 TNNT2P45379 298 aaPredicted RBP2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 TAS2R31P59538 309 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 HMGN5P82970 282 aaKnown RBP2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 ZNF616Q08AN1 781 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 ALKBH6Q3KRA9 238 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 TCEAL5Q5H9L2 206 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 C22orf42Q6IC83 251 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 NKAIN4Q8IVV8 208 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 C11orf72Q8NBR9 251 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 CHST4Q8NCG5 386 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 OR52E2Q8NGJ4 325 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 RAB3IL1Q8TBN0 382 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 TCEAL3Q969E4 200 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 RASD2Q96D21 266 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 BEX1Q9HBH7 125 aa2.28□□□□□ -2.04
PRPF4B-207ENST00000490399 ZNF233A6NK53 670 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 NCBP2LA6PVI3 153 aaKnown RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 H7C1H1 209 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 LGALS9O00182 355 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 SIRPB1O00241 398 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 CLDN11O75508 207 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 FLOT1O75955 427 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 SNX4O95219 450 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 ZNF688P0C7X2 276 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 LOXP28300 417 aaPredicted RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 RRM2P31350 389 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 PRRX1P54821 245 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 RPS23P62266 143 aaKnown RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 CRADDP78560 199 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 PRR3P79522 188 aaKnown RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 DGCR6Q14129 220 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 HSP90AB3PQ58FF7 597 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 UBE2UQ5VVX9 321 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 MRPL55Q7Z7F7 128 aaKnown RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 CMC1Q7Z7K0 106 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 TMEM256Q8N2U0 113 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 LRRC52Q8N7C0 313 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 GPR26Q8NDV2 337 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 OR11H7Q8NGC8 314 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 OR13G1Q8NGZ3 307 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 APH1BQ8WW43 257 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 SLC25A46Q96AG3 418 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 ZNF317Q96PQ6 595 aaPredicted RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 RBBP8Q99708 897 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 TBL1YQ9BQ87 522 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 SULT4A1Q9BR01 284 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 C8orf17Q9NRJ1 99 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 PTTG3PQ9NZH4 202 aa2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 CCDC59Q9P031 241 aaKnown RBP2.27□□□□□ -2.05
PRPF4B-207ENST00000490399 PALLDQ8WX93 1383 aa2.26□□□□□ -2.05
PRPF4B-207ENST00000490399 GABRR3A8MPY1 467 aa2.26□□□□□ -2.05
PRPF4B-207ENST00000490399 C9JVG2 144 aa2.26□□□□□ -2.05
PRPF4B-207ENST00000490399 EIF4E2O60573 245 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms