RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ITGA5P08648 1049 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 TMIGD3P0DMS9 266 aaPredicted RBP18.97■□□□□ 0.63
SMC4-221ENST00000489573 TIMP3P35625 211 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 RBPJQ06330 500 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 RGP1Q92546 391 aaPredicted RBP18.97■□□□□ 0.63
SMC4-221ENST00000489573 HDHD2Q9H0R4 259 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 OR52A1Q9UKL2 312 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 SLC22A13Q9Y226 551 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 TIMM10BQ9Y5J6 103 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 NBEAQ8NFP9 2946 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 A0A096LPE4 126 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 A0A1W2PPZ6 126 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 TTLL8A6PVC2 850 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 DVL2O14641 736 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 DOK2O60496 412 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 SLC19A2O60779 497 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 TNFSF13O75888 250 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 IL18BPO95998 194 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 IL2RAP01589 272 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 EDN3P14138 238 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 SLC36A2Q495M3 483 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 BCL2L15Q5TBC7 163 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 PAMR1Q6UXH9 720 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 CEACAM19Q7Z692 300 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 RPRMLQ8N4K4 120 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 OR1K1Q8NGR3 316 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 TSC22D3Q99576 134 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 KCNJ15Q99712 375 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 OR2H1Q9GZK4 316 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 MOB1AQ9H8S9 216 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 G6PC2Q9NQR9 355 aa18.96■□□□□ 0.63
SMC4-221ENST00000489573 ARHGAP21Q5T5U3 1957 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 DOCK7Q96N67 2140 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 ERVH48-1M5A8F1 160 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 GATBO75879 557 aaKnown RBP18.95■□□□□ 0.62
SMC4-221ENST00000489573 CTSSP25774 331 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 CX3CR1P49238 355 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 PRKXP51817 358 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 DGUOKQ16854 277 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 ZMAT1Q5H9K5 638 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 ANKRD16Q6P6B7 361 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 C3P1Q6ZMU1 363 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 Q6ZT83 130 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 BTLAQ7Z6A9 289 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 DOLPP1Q86YN1 238 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 FGFBP3Q8TAT2 258 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 PLSCR4Q9NRQ2 329 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 CCDC59Q9P031 241 aaKnown RBP18.95■□□□□ 0.62
SMC4-221ENST00000489573 PROCRQ9UNN8 238 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 GTF3C1Q12789 2109 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 CACNA1CQ13936 2221 aa18.95■□□□□ 0.62
SMC4-221ENST00000489573 SYNGR3O43761 229 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 MMP7P09237 267 aaPredicted RBP18.94■□□□□ 0.62
SMC4-221ENST00000489573 PATE4P0C8F1 98 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 PSG4Q00888 419 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 ECH1Q13011 328 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 ODF4Q2M2E3 257 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 ZNF774Q6NX45 483 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 ZNF283Q8N7M2 679 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 PHYHIPQ92561 330 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 PPP1R14AQ96A00 147 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 STARD4Q96DR4 205 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 OR14A2Q96R54 314 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 MED18Q9BUE0 208 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 ZNF224Q9NZL3 707 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 SVILO95425 2214 aa18.94■□□□□ 0.62
SMC4-221ENST00000489573 TRBV5-5A0A0J9YX44 114 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 CDRT1O95170 752 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 IL1AP01583 271 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 GLI4P10075 376 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 IGHV1-2P23083 117 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 CEACAM8P31997 349 aaPredicted RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 SDC2P34741 201 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 GALK2Q01415 458 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 LY6DQ14210 128 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 UNQ9370/PRO34162Q6UXP9 181 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 NAXEQ8NCW5 288 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 OR1F12Q8NHA8 337 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 AKR7LQ8NHP1 331 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 PBOV1Q9GZY1 135 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 WNT5BQ9H1J7 359 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 RNF121Q9H920 327 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 BRD7Q9NPI1 651 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 NUFIP1Q9UHK0 495 aaKnown RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 FREM1Q5H8C1 2179 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 OR6C6A6NF89 314 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 ZNF879B4DU55 563 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 CGAP01215 116 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 CALRP27797 417 aaKnown RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 OTX1P32242 354 aaPredicted RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 RPS19P39019 145 aaKnown RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 ZNF121P58317 390 aaPredicted RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 TGFBR3Q03167 851 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 Q499Y3 187 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 FAM27D1Q5T7N8 215 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 ZNF704Q6ZNC4 412 aaPredicted RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 DPPA2Q7Z7J5 298 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 ELMOD2Q8IZ81 293 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 RDH10Q8IZV5 341 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 GPR148Q8TDV2 347 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms