RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LRRC23Q53EV4 343 aaPredicted RBP1□□□□□ -2.25
SMC4-219ENST00000487747 PMF1Q6P1K2 205 aa1□□□□□ -2.25
SMC4-219ENST00000487747 MORN3Q6PF18 240 aaPredicted RBP1□□□□□ -2.25
SMC4-219ENST00000487747 SNX20Q7Z614 316 aa1□□□□□ -2.25
SMC4-219ENST00000487747 OR8J1Q8NGP2 316 aa1□□□□□ -2.25
SMC4-219ENST00000487747 NTAN1Q96AB6 310 aa1□□□□□ -2.25
SMC4-219ENST00000487747 SERPINB12Q96P63 405 aa1□□□□□ -2.25
SMC4-219ENST00000487747 ZNF649Q9BS31 505 aa1□□□□□ -2.25
SMC4-219ENST00000487747 CTNNA3Q9UI47 895 aa1□□□□□ -2.25
SMC4-219ENST00000487747 IKZF2Q9UKS7 526 aa1□□□□□ -2.25
SMC4-219ENST00000487747 VANGL2Q9ULK5 521 aa1□□□□□ -2.25
SMC4-219ENST00000487747 HYOU1Q9Y4L1 999 aa1□□□□□ -2.25
SMC4-219ENST00000487747 KIAA1671Q9BY89 1806 aa1□□□□□ -2.25
SMC4-219ENST00000487747 FLG2Q5D862 2391 aaPredicted RBP1□□□□□ -2.25
SMC4-219ENST00000487747 TRAV6A0A075B6T7 132 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 IGLV1-36A0A0B4J1U3 117 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 ZNF816-ZNF321PA0A0X1KG74 233 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 FAM240BA0A1B0GVZ2 78 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 CEACAM18A8MTB9 384 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 CDC7O00311 574 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 PFN1P07737 140 aaKnown RBP0.99□□□□□ -2.25
SMC4-219ENST00000487747 CD3GP09693 182 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 F2RP25116 425 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 IFNA8P32881 189 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 ACTG2P63267 376 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 CCNA1P78396 465 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 BST2Q10589 180 aaKnown RBP0.99□□□□□ -2.25
SMC4-219ENST00000487747 CCNJQ5T5M9 372 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 ANKRD26P1Q6NSI1 321 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 CCDC73Q6ZRK6 1079 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 EID2Q8N6I1 236 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 METTL13Q8N6R0 699 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 GPR151Q8TDV0 419 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 CXorf40AQ8TE69 158 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 NT5C3BQ969T7 300 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 TUBGCP3Q96CW5 907 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 PKNOX2Q96KN3 472 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 RBBP8Q99708 897 aa0.99□□□□□ -2.25
SMC4-219ENST00000487747 EXOSC4Q9NPD3 245 aaKnown RBP0.99□□□□□ -2.25
SMC4-219ENST00000487747 LSM7Q9UK45 103 aaKnown RBP0.99□□□□□ -2.25
SMC4-219ENST00000487747 AKNAQ7Z591 1439 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 GPR89AB7ZAQ6 455 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 CHST10O43529 356 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 TSPAN13O95857 204 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 CYB5R3P00387 301 aaPredicted RBP0.98□□□□□ -2.25
SMC4-219ENST00000487747 SERPIND1P05546 499 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 PTMAP06454 111 aaKnown RBP0.98□□□□□ -2.25
SMC4-219ENST00000487747 CTSLP07711 333 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 GPR89BP0CG08 455 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 MCF2P10911 925 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 MX1P20591 662 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 FUSP35637 526 aaKnown RBP eCLIP0.98□□□□□ -2.25
SMC4-219ENST00000487747 NSG1P42857 185 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 TPMTP51580 245 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 CCNHP51946 323 aaPredicted RBP0.98□□□□□ -2.25
SMC4-219ENST00000487747 RND2P52198 227 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 YWHAGP61981 247 aaKnown RBP eCLIP0.98□□□□□ -2.251e-117■■■■■ 400.8
SMC4-219ENST00000487747 CDK5Q00535 292 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 TWF1Q12792 350 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 ECH1Q13011 328 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 RCAN2Q14206 197 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 ZNF726P1Q15940 193 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 SGPP2Q8IWX5 399 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 LIX1Q8N485 282 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 EIF1ADQ8N9N8 165 aaKnown RBP0.98□□□□□ -2.25
SMC4-219ENST00000487747 OR2A1Q8NGT9 310 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 CNDP1Q96KN2 507 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 GON7Q9BXV9 100 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 SAMD10Q9BYL1 202 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 RACGAP1Q9H0H5 632 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 NEUROG2Q9H2A3 272 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 FGF20Q9NP95 211 aaPredicted RBP0.98□□□□□ -2.25
SMC4-219ENST00000487747 KCNJ16Q9NPI9 418 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 SUN2Q9UH99 717 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 R4GN34 69 aa0.98□□□□□ -2.25
SMC4-219ENST00000487747 IGHV3-72A0A0B4J1Y9 119 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 IGHV7-4-1A0A0J9YVY3 117 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 GLYATL1P3A0A0U1RQE8 302 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 SDHAF1A6NFY7 115 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 OR6C70A6NIJ9 312 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 E7EQL1 145 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 CST1P01037 141 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 ASGR1P07306 291 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 INAFM2P0DMQ5 153 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 ZNF250P15622 560 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 RAB3AP20336 220 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 CEACAM3P40198 252 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 PRLHRP49683 370 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 PRMT2P55345 433 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 SYNJ2BPP57105 145 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 UBE2NP61088 152 aaKnown RBP0.97□□□□□ -2.25
SMC4-219ENST00000487747 ACTR1AP61163 376 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 QPRTQ15274 297 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 OR7A5Q15622 319 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 CENPPQ6IPU0 288 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 CERS6Q6ZMG9 384 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 RUFY3Q7L099 469 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 NIPA1Q7RTP0 329 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 NPWQ8N729 165 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 GPATCH11Q8N954 259 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms