RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 A0A1B0GW55 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 OR6C74A6NCV1 312 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 FAM47DPA6NHR8 397 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 OR2AG2A6NM03 316 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 SMKR1H3BMG3 65 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 H7C417 338 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 LSM1O15116 133 aaKnown RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 FKBP6O75344 327 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 REM1O75628 298 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 HLA-DQA1P01909 254 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 IL4P05112 153 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 OR8U9P0C7N5 309 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DUX4L2P0CJ85 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DUX4L3P0CJ86 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DUX4L5P0CJ88 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DUX4L6P0CJ89 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DUX4L7P0CJ90 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 C1GALT1C1LP0DN25 315 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 RAB3AP20336 220 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 WARSP23381 471 aaKnown RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 FOXN2P32314 431 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 SLC1A1P43005 524 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 HCAR3P49019 387 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 P2RX1P51575 399 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 CDKN2DP55273 166 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 ATP5IP56385 69 aaPredicted RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 VSX2P58304 361 aaPredicted RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 EIF3EP60228 445 aaKnown RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 HMGN5P82970 282 aaKnown RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 TGM3Q08188 693 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 IFT88Q13099 833 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 SELENBP1Q13228 472 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 C12orf54Q6X4T0 127 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 CERS6Q6ZMG9 384 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 TMEM150AQ86TG1 271 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 CDKL3Q8IVW4 592 aaPredicted RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 IQCKQ8N0W5 287 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 NPWQ8N729 165 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 OR6N1Q8NGY5 312 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 LINC01560Q8TB33 94 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 NUBPLQ8TB37 319 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 RAB3IL1Q8TBN0 382 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 CAPSLQ8WWF8 208 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 PTX4Q96A99 478 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 GALNT14Q96FL9 552 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DNAJC1Q96KC8 554 aaKnown RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DOK1Q99704 481 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 MICU1Q9BPX6 476 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 SULT4A1Q9BR01 284 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 FBXO6Q9NRD1 293 aaPredicted RBP1.51□□□□□ -2.17
CCDC66-221ENST00000487739 DUX4Q9UBX2 424 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 MTFP1Q9UDX5 166 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 VANGL2Q9ULK5 521 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 KCNE3Q9Y6H6 103 aa1.51□□□□□ -2.17
CCDC66-221ENST00000487739 MUC6Q6W4X9 2439 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 IGHV1OR15-9A0A0B4J2B8 117 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 IGKV1-8A0A0C4DH67 115 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SMCO3A2RU48 225 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF850A8MQ14 1090 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 C16orf90A8MZG2 172 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 H0YJW9 148 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 BPY2O14599 106 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 NVLO15381 856 aaKnown RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SOCS1O15524 211 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 CLDN11O75508 207 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 CIB2O75838 187 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SNX4O95219 450 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 H6PDO95479 791 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 TROVE2P10155 538 aaKnown RBP eCLIP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 CXCL12P48061 93 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 CCNG1P51959 295 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 CRISP1P54107 249 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 PPP1CBP62140 327 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SP4Q02446 784 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 PIGHQ14442 188 aaPredicted RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF266Q14584 549 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 MPV17L2Q567V2 206 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 C9orf135Q5VTT2 229 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 REEP3Q6NUK4 255 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 ZYG11AQ6WRX3 759 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SLC16A14Q7RTX9 510 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SLC16A13Q7RTY0 426 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 SNX20Q7Z614 316 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 GTPBP8Q8N3Z3 284 aaPredicted RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 COX18Q8N8Q8 333 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 OR4A4PQ8NGN8 299 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 LILRB4Q8NHJ6 448 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 TMEM230Q96A57 120 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 RASD2Q96D21 266 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF317Q96PQ6 595 aaPredicted RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 HSD17B10Q99714 261 aaKnown RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 FGF23Q9GZV9 251 aaPredicted RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 BEX1Q9HBH7 125 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 RETNQ9HD89 108 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 PTTG3PQ9NZH4 202 aa1.5□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF230Q9UIE0 474 aaPredicted RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 AHDC1Q5TGY3 1603 aaPredicted RBP1.5□□□□□ -2.17
CCDC66-221ENST00000487739 NCBP2LA6PVI3 153 aaKnown RBP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 LYRM9A8MSI8 78 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 H7C1H1 209 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms