RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 PQLC2LA1A4F0 135 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 OR2M5A3KFT3 312 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 SLC22A20A6NK97 555 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 HNRNPCL2B2RXH8 293 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 HNRNPCL3B7ZW38 293 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 G3V3Q6 166 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 H3BML4 177 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 ZNF593O00488 134 aaPredicted RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 PLPP2O43688 288 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 STX11O75558 287 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 APOL3O95236 402 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 CFDP00746 253 aaPredicted RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 GIPP09681 153 aaPredicted RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 HNRNPCL4P0DMR1 293 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 NR2F1P10589 423 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 HPGDP15428 266 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 TBXA2RP21731 343 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 ATP6V1E1P36543 226 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 KHKP50053 298 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 SNTB2Q13425 540 aaKnown RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.54□□□□□ -0.88
DDX56-212ENST00000485367 FAM209BQ5JX69 171 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 ELFN2Q5R3F8 820 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 RGS7BPQ6MZT1 257 aaPredicted RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 CXXC5Q7LFL8 322 aaKnown RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 NLRC3Q7RTR2 1065 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 HSD17B13Q7Z5P4 300 aaPredicted RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 NR2C2APQ86WQ0 139 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 KLBQ86Z14 1044 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 OR4F15Q8NGB8 312 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 OR8D4Q8NGM9 314 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 FAM222BQ8WU58 562 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 SGK3Q96BR1 496 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 SLC35G5Q96KT7 338 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 PIGQQ9BRB3 760 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 IFT27Q9BW83 186 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 EGLN3Q9H6Z9 239 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 PLEKHA1Q9HB21 404 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 NANSQ9NR45 359 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 UBQLN4Q9NRR5 601 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 DNAJB12Q9NXW2 375 aaKnown RBP9.54□□□□□ -0.88
DDX56-212ENST00000485367 BAIAP2Q9UQB8 552 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 A0A087WUU8 490 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 TRAV1-2A0A0B4J238 106 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 A0A1B0GW55 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 PLSCR5A0PG75 271 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 ALG1L2C9J202 215 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 LINC01387J3KSC0 135 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 M0R3H8 397 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 SCDO00767 359 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 HCRTR2O43614 444 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 NGFRP08138 427 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4L2P0CJ85 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4L3P0CJ86 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4L4P0CJ87 422 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4L5P0CJ88 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4L6P0CJ89 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4L7P0CJ90 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 PAICSP22234 425 aaKnown RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 SUCLG1P53597 346 aaKnown RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 CLDN15P56746 228 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 AP3S2P59780 193 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 RAP2BP61225 183 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 TSPAN5P62079 268 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 RPS26P62854 115 aaKnown RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 ST3GAL3Q11203 375 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 BTN1A1Q13410 526 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 KLF9Q13886 244 aaPredicted RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 PGGHGQ32M88 737 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 EXOSC6Q5RKV6 272 aaKnown RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 PXKQ7Z7A4 578 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 OR6V1Q8N148 313 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 OR56A1Q8NGH5 318 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 OR6M1Q8NGM8 313 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 OR6T1Q8NGN1 323 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 ADAMTS15Q8TE58 950 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 SCARB1Q8WTV0 552 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 NRGNQ92686 78 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 STACQ99469 402 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 RBM24Q9BX46 236 aaKnown RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 ACTRT3Q9BYD9 372 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 SLC19A3Q9BZV2 496 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 C20orf85Q9H1P6 137 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 ZCCHC4Q9H5U6 513 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 KRCC1Q9NPI7 259 aaPredicted RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUSP22Q9NRW4 184 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 JKAMPQ9P055 326 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 RPS6KB2Q9UBS0 482 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 ING1Q9UK53 422 aaPredicted RBP9.53□□□□□ -0.88
DDX56-212ENST00000485367 COPS3Q9UNS2 423 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 VDAC3Q9Y277 283 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 GPR52Q9Y2T5 361 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 AKAP9Q99996 3911 aa9.53□□□□□ -0.88
DDX56-212ENST00000485367 A0A0G2JK05 382 aa9.52□□□□□ -0.88
DDX56-212ENST00000485367 A0A1W2PNV4 684 aa9.52□□□□□ -0.88
DDX56-212ENST00000485367 L7N2F9 121 aa9.52□□□□□ -0.88
DDX56-212ENST00000485367 CTAG2O75638 210 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms