RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 COPS4Q9BT78 406 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 DCUN1D5Q9BTE7 237 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 KLHL31Q9H511 634 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CDH20Q9HBT6 801 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PRTFDC1Q9NRG1 225 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 RAI1Q7Z5J4 1906 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-205ENST00000485055 AHCTF1Q8WYP5 2266 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 IGLV3-32A0A0A0MS00 114 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 A0A0G2JNJ9 132 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 TRBV11-1A0A0K0K1C0 115 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 A0A1W2PPE3 182 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 K7EN84 100 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 hCG_2039718K7EN88 272 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ACOX3O15254 700 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PCDH7O60245 1069 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 BANF1O75531 89 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 MED6O75586 246 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 SOX30O94993 753 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PSMG1O95456 288 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 FADS2O95864 444 aaKnown RBP4.64□□□□□ -1.67
CCDC39-205ENST00000485055 HPRP00739 348 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 HPNP05981 417 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OPRM1P35372 400 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CYB561P49447 251 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 DLX5P56178 289 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ARG2P78540 354 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 RBBP4Q09028 425 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 AQP6Q13520 282 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 TPBGQ13641 420 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CRMP1Q14194 572 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 NSDHLQ15738 373 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 H2BFWTQ7Z2G1 175 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CD163Q86VB7 1156 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PTOV1Q86YD1 416 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PGAM4Q8N0Y7 254 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 LRRC25Q8N386 305 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OR52L2PQ8NGH6 319 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OR52I1Q8NGK6 324 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 RASSF5Q8WWW0 418 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF582Q96NG8 517 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-205ENST00000485055 FAM173AQ9BQD7 235 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 SLC30A2Q9BRI3 323 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 DUSP26Q9BV47 211 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 TMEM109Q9BVC6 243 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 IFT27Q9BW83 186 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PLGRKTQ9HBL7 147 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 EXD2Q9NVH0 621 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 Q9UFV3 132 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OR14J1Q9UGF5 321 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PCTPQ9UKL6 214 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 SNX24Q9Y343 169 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ATMQ13315 3056 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF462Q96JM2 2506 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ATRXP46100 2492 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OR7A17O14581 309 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CASKO14936 926 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 WDR1O75083 606 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GPR75O95800 540 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 C2P06681 752 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SRD5A1P18405 259 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SSTR2P30874 369 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 IDH2P48735 452 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SSR4P51571 173 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TRAF3Q13114 568 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ABRAXAS2Q15018 415 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CCDC58Q4VC31 144 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PXDC1Q5TGL8 231 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FAM71F2Q6NXP2 309 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ULK3Q6PHR2 472 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF793Q6ZN11 406 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PQLC2Q6ZP29 291 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 LANCL3Q6ZV70 420 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF615Q8N8J6 731 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ACOT4Q8N9L9 421 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CATSPER1Q8NEC5 780 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OR4Q3Q8NH05 313 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FBXO25Q8TCJ0 367 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SKA2Q8WVK7 121 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ERGIC1Q969X5 290 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CCDC126Q96EE4 140 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TIMD4Q96H15 378 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZFP3Q96NJ6 502 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SIGLEC12Q96PQ1 595 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF382Q96SR6 550 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 MBOAT4Q96T53 435 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 RSG1Q9BU20 258 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CXXC4Q9H2H0 198 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PROK2Q9HC23 129 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ACSS1Q9NUB1 689 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GSTK1Q9Y2Q3 226 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 HELZ2Q9BYK8 2649 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF98A6NK75 572 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ATP6V1G2-DDX39BF2Z307 99 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 POC1B-GALNT4F8VUJ3 575 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 J3QR06 171 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 KALRNO60229 2985 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 NOS1APO75052 506 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SYF2O95926 243 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 IFNW1P05000 195 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 NGFRP08138 427 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms