RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 C22orf39Q6P5X5 142 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 ERASQ7Z444 233 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 MMGT1Q8N4V1 131 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 TEX9Q8N6V9 391 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 EIF1ADQ8N9N8 165 aaKnown RBP3.49□□□□□ -1.85
CCDC171-207ENST00000478913 OR52K2Q8NGK3 314 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 RAB3IL1Q8TBN0 382 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 ISOC1Q96CN7 298 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 SDSLQ96GA7 329 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 DHTKD1Q96HY7 919 aaPredicted RBP3.49□□□□□ -1.85
CCDC171-207ENST00000478913 Q9H3A6 140 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 ASB8Q9H765 288 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 ZNF702PQ9H963 129 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 RDH8Q9NYR8 311 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 ATXN10Q9UBB4 475 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 CRLS1Q9UJA2 301 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 LRP2P98164 4655 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 CCDC88CQ9P219 2028 aa3.49□□□□□ -1.85
CCDC171-207ENST00000478913 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 A0A0U1RQV5 110 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 GMNCA6NCL1 334 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 LRRIQ3A6PVS8 624 aaPredicted RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 CTDNEP1O95476 244 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 FAM107AO95990 144 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 XRCC1P18887 633 aaPredicted RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 TEAD1P28347 426 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 ADORA2BP29275 332 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 CCT6AP40227 531 aaKnown RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 PRPHP41219 470 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 DIO3P55073 304 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 YWHAGP61981 247 aaKnown RBP eCLIP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 UBE2IP63279 158 aaKnown RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 BCL2L1Q07817 233 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 PRR4Q16378 134 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 TMEM52BQ4KMG9 183 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 BEX5Q5H9J7 111 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 OR5M10Q6IEU7 315 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 ZCCHC12Q6PEW1 402 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 RNF10Q8N5U6 811 aaKnown RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 C14orf178Q8N769 122 aaPredicted RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 Q8N7P7 452 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 SDR9C7Q8NEX9 313 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 OR2L5Q8NG80 312 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 LINC01006Q8NI28 216 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 SLC2A14Q8TDB8 520 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 TRUB1Q8WWH5 349 aaKnown RBP3.48□□□□□ -1.85
CCDC171-207ENST00000478913 SELENOMQ8WWX9 145 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 IFT81Q8WYA0 676 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 TBC1D31Q96DN5 1066 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 DTNBP1Q96EV8 351 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 ITCHQ96J02 903 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 ATP6V1G3Q96LB4 118 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 FAM210AQ96ND0 272 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 VPS35Q96QK1 796 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 TSG101Q99816 390 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 NMUR2Q9GZQ4 415 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 VCXQ9H320 206 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 EXO5Q9H790 373 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 COG4Q9H9E3 785 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 CHD5Q8TDI0 1954 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 TCHHQ07283 1943 aa3.48□□□□□ -1.85
CCDC171-207ENST00000478913 KIAA1549Q9HCM3 1950 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 FAM74A7A6NL05 159 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 LIN7AO14910 233 aaPredicted RBP3.47□□□□□ -1.85
CCDC171-207ENST00000478913 ANGPTL7O43827 346 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 AKR7A3O95154 331 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CRYBA1P05813 215 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CSF3P09919 207 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 ATP5A1P25705 553 aaKnown RBP3.47□□□□□ -1.85
CCDC171-207ENST00000478913 GNA11P29992 359 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 MDH1P40925 334 aaKnown RBP3.47□□□□□ -1.85
CCDC171-207ENST00000478913 PTGFRP43088 359 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 RWDD2BP57060 319 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 PLGLB1Q02325 96 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 BDH1Q02338 343 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 DYNC1I2Q13409 638 aaKnown RBP3.47□□□□□ -1.85
CCDC171-207ENST00000478913 DPYSL3Q14195 570 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 SLC9A3R2Q15599 337 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 TRIP10Q15642 601 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 PYCR3Q53H96 274 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 HSP90AA4PQ58FG1 418 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 LELP1Q5T871 98 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 AGBL2Q5U5Z8 902 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 C16orf87Q6PH81 154 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CYS1Q717R9 158 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 SERPINA9Q86WD7 417 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CBWD2Q8IUF1 395 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CRLF3Q8IUI8 442 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CEND1Q8N111 149 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 MREGQ8N565 214 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 OR2T33Q8NG76 320 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 OR5AU1Q8NGC0 362 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 OR9A4Q8NGU2 314 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 MCOLN3Q8TDD5 553 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 AENQ8WTP8 325 aaKnown RBP3.47□□□□□ -1.85
CCDC171-207ENST00000478913 RNF139Q8WU17 664 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 DYDC1Q8WWB3 177 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 IL1F10Q8WWZ1 152 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms