RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 EFNB3Q15768 340 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 VHLLQ6RSH7 139 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 ARL9Q6T311 187 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 UNQ6126/PRO20091Q6UXV3 157 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 DPY19L4Q7Z388 723 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 DCXRQ7Z4W1 244 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 OR10S1Q8NGN2 331 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 OR6N2Q8NGY6 317 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 ST7LQ8TDW4 575 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 C4orf45Q96LM5 186 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 ATF6BQ99941 703 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 ELOVL3Q9HB03 270 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 DLL4Q9NR61 685 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 DDX28Q9NUL7 540 aaKnown RBP23.06■■□□□ 1.28
CCM2-211ENST00000478582 HAO2Q9NYQ3 351 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 OVOL3O00110 214 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 GPRIN2O60269 458 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 FAM157BP0CG42 384 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 FOSL1P15407 271 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 GGTLC2Q14390 218 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 SWI5Q1ZZU3 235 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 RSPO1Q2MKA7 263 aaPredicted RBP23.05■■□□□ 1.28
CCM2-211ENST00000478582 MST1LQ2TV78 715 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 C11orf71Q6IPW1 123 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 TMEM154Q6P9G4 183 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 PRSS57Q6UWY2 283 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 ZNF101Q8IZC7 436 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 ZNF454Q8N9F8 522 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 SLC7A6Q92536 515 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 GSX2Q9BZM3 304 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 TBCCD1Q9NVR7 557 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 CMAHPQ9Y471 501 aa23.05■■□□□ 1.28
CCM2-211ENST00000478582 B9A039 149 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 SELENOFO60613 162 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 PAX1P15863 534 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 RIPK1Q13546 671 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 Q5PR19 223 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 RHOUQ7L0Q8 258 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 SLC16A9Q7RTY1 509 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 OTOSQ8NHW6 89 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 UBE2FQ969M7 185 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 PERPQ96FX8 193 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 CXorf56Q9H5V9 222 aa23.04■■□□□ 1.28
CCM2-211ENST00000478582 J3QW42 95 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 TUBG1P23258 451 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 EVX1P49640 407 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 TMED1Q13445 227 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 EIF2B1Q14232 305 aaKnown RBP23.03■■□□□ 1.28
CCM2-211ENST00000478582 MSMPQ1L6U9 139 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 ZNF555Q8NEP9 628 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 MRPL24Q96A35 216 aaKnown RBP23.03■■□□□ 1.28
CCM2-211ENST00000478582 SLAMF6Q96DU3 332 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 ZNF582Q96NG8 517 aaPredicted RBP23.03■■□□□ 1.28
CCM2-211ENST00000478582 ABHD6Q9BV23 337 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 YIPF3Q9GZM5 350 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 TUBG2Q9NRH3 451 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 WARS2Q9UGM6 360 aaKnown RBP23.03■■□□□ 1.28
CCM2-211ENST00000478582 PLCE1Q9P212 2302 aa23.03■■□□□ 1.28
CCM2-211ENST00000478582 ABHD16AO95870 558 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 DBHP09172 617 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 HTR1FP30939 366 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 PTH2RP49190 550 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 RGS6P49758 472 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 NUDT6P53370 316 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 OCLNQ16625 522 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 MEDAGQ5VYS4 303 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 RGS7BPQ6MZT1 257 aaPredicted RBP23.02■■□□□ 1.28
CCM2-211ENST00000478582 OR1J1Q8NGS3 322 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 RNF133Q8WVZ7 376 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 RFKQ969G6 155 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 PLK3Q9H4B4 646 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 ZNF701Q9NV72 531 aaPredicted RBP23.02■■□□□ 1.28
CCM2-211ENST00000478582 GRIP1Q9Y3R0 1128 aa23.02■■□□□ 1.28
CCM2-211ENST00000478582 ZNF469Q96JG9 3925 aaPredicted RBP23.02■■□□□ 1.28
CCM2-211ENST00000478582 TMEM129A0AVI4 362 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 MPZL2O60487 215 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 NGFP01138 241 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 LCKP06239 509 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 ZNF250P15622 560 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 GABRB1P18505 474 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 OTX1P32242 354 aaPredicted RBP23.01■■□□□ 1.27
CCM2-211ENST00000478582 NAA10P41227 235 aaPredicted RBP23.01■■□□□ 1.27
CCM2-211ENST00000478582 RFPL4BQ6ZWI9 263 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 RHOXF1Q8NHV9 184 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 VCXQ9H320 206 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 OR51B6Q9H340 312 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 FBXO9Q9UK97 447 aaPredicted RBP23.01■■□□□ 1.27
CCM2-211ENST00000478582 ACANP16112 2415 aa23.01■■□□□ 1.27
CCM2-211ENST00000478582 ZNF878C9JN71 531 aa23■■□□□ 1.27
CCM2-211ENST00000478582 ACSM4P0C7M7 580 aa23■■□□□ 1.27
CCM2-211ENST00000478582 BMP4P12644 408 aa23■■□□□ 1.27
CCM2-211ENST00000478582 ALOX5APP20292 161 aa23■■□□□ 1.27
CCM2-211ENST00000478582 ERVS71-1P61550 626 aa23■■□□□ 1.27
CCM2-211ENST00000478582 TTC23Q5W5X9 447 aa23■■□□□ 1.27
CCM2-211ENST00000478582 COLCA1Q6ZS62 124 aa23■■□□□ 1.27
CCM2-211ENST00000478582 ENTHD1Q8IYW4 607 aa23■■□□□ 1.27
CCM2-211ENST00000478582 ABHD4Q8TB40 342 aa23■■□□□ 1.27
CCM2-211ENST00000478582 NRG4Q8WWG1 115 aa23■■□□□ 1.27
CCM2-211ENST00000478582 SPTSSAQ969W0 71 aa23■■□□□ 1.27
CCM2-211ENST00000478582 MARS2Q96GW9 593 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms