RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 XRCC3O43542 346 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NUDT21O43809 227 aaKnown RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 OR2T1O43869 369 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 FADS1O60427 444 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 GMDSO60547 372 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NPIPB7O75200 414 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PIAS2O75928 621 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NUDT14O95848 222 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 TPOP07202 933 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ANKRD34CP0C6C1 535 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 CPN1P15169 458 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF24P17028 368 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ADRA2CP18825 462 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 DNASE1P24855 282 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 CDK2P24941 298 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 CRABP1P29762 137 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 KIR3DL2P43630 455 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SOX2P48431 317 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 RIDAP52758 137 aaKnown RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SUMO3P55854 103 aaPredicted RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PER3P56645 1201 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 RAP1BP61224 184 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SNRPD2P62316 118 aaKnown RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 LCN6P62502 163 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 RAP1AP62834 184 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ROM1Q03395 351 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SSBP1Q04837 148 aaKnown RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZP4Q12836 540 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ITPR1Q14643 2758 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 KCNAB1Q14722 419 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SLC17A1Q14916 467 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 MFSD13AQ14CX5 517 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NSDHLQ15738 373 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 CT83Q5H943 113 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 TOR2AQ5JU69 321 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 C1orf140Q5VVS0 124 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NKAIN2Q5VXU1 208 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SFRP4Q6FHJ7 346 aaPredicted RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 KCTD18Q6PI47 426 aaPredicted RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 DNM1P34Q6PK57 102 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 DNM1P46Q6ZS02 220 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 DPY19L4Q7Z388 723 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PRSS42Q7Z5A4 293 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 MARCH3Q86UD3 253 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 GLB1L2Q8IW92 636 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 C9orf40Q8IXQ3 194 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PM20D2Q8IYS1 436 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF679Q8IYX0 411 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PRSS35Q8N3Z0 413 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SPICQ8N5J4 248 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF441Q8N8Z8 693 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 KNL1Q8NG31 2342 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 OR8H1Q8NGG4 311 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 OR1L3Q8NH93 324 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ANGPTL6Q8NI99 470 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF519Q8TB69 540 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 RNF128Q8TEB7 428 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 THEM6Q8WUY1 208 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 TSEN15Q8WW01 171 aaKnown RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM234Q8WY98 164 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 MCHR2Q969V1 340 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ORAI1Q96D31 301 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NXPE2Q96DL1 559 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SLC41A2Q96JW4 573 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PCNX1Q96RV3 2341 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SLX1AQ9BQ83 275 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PTDSS2Q9BVG9 487 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF436Q9C0F3 470 aaPredicted RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SYT4Q9H2B2 425 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 DLL4Q9NR61 685 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 TAS2R5Q9NYW4 299 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 KCNG2Q9UJ96 466 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ELF5Q9UKW6 265 aaPredicted RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 MGAT4AQ9UM21 535 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PLA2G2DQ9UNK4 145 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ATP23Q9Y6H3 246 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 CACNA1CQ13936 2221 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 ABCA7Q8IZY2 2146 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 KIAA1549Q9HCM3 1950 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 GON4LQ3T8J9 2241 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 TRAV8-7A0A075B6U6 113 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 IGLV1-36A0A0B4J1U3 117 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SLC22A23A1A5C7 686 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 UBE2QL1A1L167 161 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 LINC00862A6NCI5 91 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ANKUB1A6NFN9 424 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 TUBAL3A6NHL2 446 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 C4orf47A7E2U8 309 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 C11orf98E9PRG8 122 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 H7C417 338 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SULT1C2O00338 296 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SLC17A2O00624 439 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 PLPP3O14495 311 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ARPC1BO15143 372 aaKnown RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 PRKNO60260 465 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CREBL2O60519 120 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 NOS1APO75052 506 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SDC3O75056 442 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms