RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 OR8U9P0C7N5 309 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 ZNF74Q16587 644 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 ZNF260Q3ZCT1 412 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 JAGN1Q8N5M9 183 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 OR8U1Q8NH10 309 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 MARCH1Q8TCQ1 289 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 GRHPRQ9UBQ7 328 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 LYL1P12980 280 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 SELLP14151 372 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 IGFBP3P17936 291 aaPredicted RBP16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 SULT1A2P50226 295 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 SLC17A1Q14916 467 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 FAM24BQ8N5W8 94 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 OR5T3Q8NGG3 340 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 OR51F2Q8NH61 342 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 WFIKKN2Q8TEU8 576 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 ASB17Q8WXJ9 295 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 TSPAN32Q96QS1 320 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 OR8B4Q96RC9 309 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 MAP3K3Q99759 626 aa16.7■□□□□ 0.26
ECHDC1-214ENST00000474289 OTOL1A6NHN0 477 aaPredicted RBP16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 CTSVO60911 334 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 SPOCK1Q08629 439 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 EBPQ15125 230 aaKnown RBP16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 EEF1A1P5Q5VTE0 462 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 TM4SF19Q96DZ7 209 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 SLC25A44Q96H78 314 aaPredicted RBP16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 OR2A5Q96R48 311 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 C20orf24Q9BUV8 137 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 TOLLIPQ9H0E2 274 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 PARP11Q9NR21 331 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 PLA2G2EQ9NZK7 142 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 POMT1Q9Y6A1 747 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 CDH23Q9H251 3354 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB27BO00194 218 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 LY86O95711 162 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 CSTAP01040 98 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 GSK3AP49840 483 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 DEFA6Q01524 100 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 MFGE8Q08431 387 aaPredicted RBP16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 EIF5AL1Q6IS14 154 aaKnown RBP16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 PPP1R3BQ86XI6 285 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 HOXB13Q92826 284 aaPredicted RBP16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 SGK3Q96BR1 496 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 FOXN4Q96NZ1 517 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 TIMM29Q9BSF4 260 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 PRR13Q9NZ81 148 aa16.69■□□□□ 0.26
ECHDC1-214ENST00000474289 GPR89AB7ZAQ6 455 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 TXNDC12O95881 172 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 CSTBP04080 98 aaKnown RBP16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 GPR89BP0CG08 455 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 CD37P11049 281 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 PPM1AP35813 382 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 ADPRHP54922 357 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 HMGN3Q15651 99 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 ZNF141Q15928 474 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 Q3ZCU0 254 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 TEX30Q5JUR7 227 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 Q6ZRG5 221 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 FRMD1Q8N878 549 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 LPAR4Q99677 370 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 M0R036 132 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 ST8SIA5O15466 376 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 NUDT21O43809 227 aaKnown RBP16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 NME1P15531 152 aaKnown RBP16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 FSTP19883 344 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 CENPAP49450 140 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 RPL18Q07020 188 aaKnown RBP16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 PYY3Q5JQD4 70 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 TMEM184AQ6ZMB5 413 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 OR4D6Q8NGJ1 314 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 MMP25Q9NPA2 562 aa16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 GDF2Q9UK05 429 aaPredicted RBP16.68■□□□□ 0.26
ECHDC1-214ENST00000474289 CYR61O00622 381 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 GPR37O15354 613 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 SLC34A2O95436 690 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 IFNA6P05013 189 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 ARG1P05089 322 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB5CP51148 216 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 ENPP2Q13822 863 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 TMEM128Q5BJH2 165 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 GRASPQ7Z6J2 395 aaPredicted RBP16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 ZNF679Q8IYX0 411 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 CHST4Q8NCG5 386 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 LCN9Q8WX39 176 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB3CQ96E17 227 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 MALSU1Q96EH3 234 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 LYRM4Q9HD34 91 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 PILRAQ9UKJ1 303 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 RHPN2P1A8MT19 583 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 PMP2P02689 132 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 RNF224P0DH78 156 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 TAS2R31P59538 309 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB32Q13637 225 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 NNATQ16517 81 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 CDPF1Q6NVV7 123 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms