RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PAQR4Q8N4S7 273 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-214ENST00000473778 ACBD4Q8NC06 268 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 UCK1Q9HA47 277 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 SLC17A5Q9NRA2 495 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MED29Q9NX70 200 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 CTSFQ9UBX1 484 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 FARSAQ9Y285 508 aaKnown RBP9.78□□□□□ -0.84
C9orf3-214ENST00000473778 SLC5A6Q9Y289 635 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 SHISA8B8ZZ34 492 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 SOX1O00570 391 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-214ENST00000473778 CCSO14618 274 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 TO15178 435 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 EIF4E2O60573 245 aaKnown RBP9.78□□□□□ -0.84
C9orf3-214ENST00000473778 IGHMP01871 453 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 APOC1P02654 83 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MELTFP08582 738 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 FSTP19883 344 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 ACHEP22303 614 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 TAS2R19P59542 299 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 GLO1Q04760 184 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 DHRS2Q13268 280 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 NKPD1Q17RQ9 610 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 FAM74A1Q5RGS3 127 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 JAGN1Q8N5M9 183 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 GVQW1Q8N7I0 195 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 OR1N1Q8NGS0 311 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 OR13C3Q8NGS6 347 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 DPYSL5Q9BPU6 564 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MFFQ9GZY8 342 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 ALX4Q9H161 411 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MED9Q9NWA0 146 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MRTO4Q9UKD2 239 aaKnown RBP9.78□□□□□ -0.84
C9orf3-214ENST00000473778 MKL2Q9ULH7 1088 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 VSIG4Q9Y279 399 aa9.78□□□□□ -0.84
C9orf3-214ENST00000473778 ADAMTS20P59510 1910 aa9.77□□□□□ -0.84
C9orf3-214ENST00000473778 TNRC18O15417 2968 aaPredicted RBP9.77□□□□□ -0.84
C9orf3-214ENST00000473778 LOC100509620A0A075B734 347 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 LOC390937A0A1W2PQ73 354 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 OR14I1A6ND48 311 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 P2RY10O00398 339 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 PLATP00750 562 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 FGF2P09038 288 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 RPA2P15927 270 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 C4BPBP20851 252 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 CD38P28907 300 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 SLC26A5P58743 744 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 ACTBP60709 375 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 ACTG1P63261 375 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 UNC119Q13432 240 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 GK2Q14410 553 aaPredicted RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 UBXN2BQ14CS0 331 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 GLT8D1Q68CQ7 371 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 OR52W1Q6IF63 320 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 KCTD18Q6PI47 426 aaPredicted RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 GRINAQ7Z429 371 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 ADGRE4PQ86SQ3 457 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 CD163Q86VB7 1156 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 GKN2Q86XP6 184 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 TMEM229BQ8NBD8 167 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 OR5M9Q8NGP3 310 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 THAP3Q8WTV1 239 aaPredicted RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 NKD1Q969G9 470 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 INTS12Q96CB8 462 aaKnown RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 R4GMQ9 66 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 MUC3AQ02505 3323 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 A0A1B0GTI1 187 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 RFPL4AA6NLU0 287 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 RFPL4AL1F8VTS6 287 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 RAB27BO00194 218 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 EIF1AYO14602 144 aaKnown RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 CD74P04233 296 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 S100A6P06703 90 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 ARRB1P49407 418 aaPredicted RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 PNLIPRP2P54317 469 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 MPPED2Q15777 294 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 SCGB2B2Q4G0G5 96 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 HLA-DQA1Q5Y7H0 255 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 RALGAPA1Q6GYQ0 2036 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 LIN54Q6MZP7 749 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 NAXDQ8IW45 347 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 CDH26Q8IXH8 852 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 C12orf45Q8N5I9 185 aaPredicted RBP9.77□□□□□ -0.85
C9orf3-214ENST00000473778 BVESQ8NE79 360 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 ASB10Q8WXI3 467 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 FAM46BQ96A09 425 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 EDEM2Q9BV94 578 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 FOXQ1Q9C009 403 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 CHRNA10Q9GZZ6 450 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 PTGES2Q9H7Z7 377 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 CNTD2Q9H8S5 307 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 OR52A1Q9UKL2 312 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 HHLA2Q9UM44 414 aa9.77□□□□□ -0.85
C9orf3-214ENST00000473778 TMEM269A0A1B0GVZ9 245 aa9.76□□□□□ -0.85
C9orf3-214ENST00000473778 ABCD4O14678 606 aa9.76□□□□□ -0.85
C9orf3-214ENST00000473778 KCNAB3O43448 404 aa9.76□□□□□ -0.85
C9orf3-214ENST00000473778 PMS2P2O95744 297 aa9.76□□□□□ -0.85
C9orf3-214ENST00000473778 CD2P06729 351 aa9.76□□□□□ -0.85
C9orf3-214ENST00000473778 FBXW4P57775 412 aa9.76□□□□□ -0.85
C9orf3-214ENST00000473778 SSBP1Q04837 148 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms