RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SCN3BQ9NY72 215 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 GLTPQ9NZD2 209 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 WARS2Q9UGM6 360 aaKnown RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 MYRFQ9Y2G1 1151 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 TPRKBQ9Y3C4 175 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 RPL36Q9Y3U8 105 aaKnown RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 PCDHGB5Q9Y5G0 923 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 IRGMA1A4Y4 181 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 LRP5LA4QPB2 252 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 RPL36A-HNRNPH2H7BZ11 118 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 H7C1C5 153 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 SLC1A7O00341 560 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 FAM20BO75063 409 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 KRT33AO76009 404 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 TNFAIP8O95379 198 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 ERCC1P07992 297 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 DBTP11182 482 aaKnown RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 DAOP14920 347 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 SPI1P17947 270 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 SLC2A5P22732 501 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 CALCRP30988 508 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 IL2RGP31785 369 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 MTNR1AP48039 350 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF133P52736 654 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 CDH15P55291 814 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 GABARAPL2P60520 117 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 RPS7P62081 194 aaKnown RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 LCN6P62502 163 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 HGFACQ04756 655 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 POU4F2Q12837 409 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 RIN1Q13671 783 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 APOFQ13790 326 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 HIST3H3Q16695 136 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 KCTD21Q4G0X4 260 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 KLHL12Q53G59 568 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 CARD17Q5XLA6 110 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 MEPCEQ7L2J0 689 aaKnown RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 LINGO2Q7L985 606 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 C20orf196Q8IYI0 205 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 SYT14Q8NB59 555 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 PROKR2Q8NFJ6 384 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 BBS1Q8NFJ9 593 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 BPIFB6Q8NFQ5 453 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 OR9Q1Q8NGQ5 310 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 OR6N1Q8NGY5 312 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 ZFAND2BQ8WV99 257 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 TMEM54Q969K7 222 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 NMD3Q96D46 503 aaKnown RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 DOK1Q99704 481 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 HCAR1Q9BXC0 346 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 OR51V1Q9H2C8 321 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 MED20Q9H944 212 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 SEC61A2Q9H9S3 476 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 MRPS18AQ9NVS2 196 aaKnown RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 HAO2Q9NYQ3 351 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 CNOT2Q9NZN8 540 aaKnown RBP7.81□□□□□ -1.16
SF3A1-206ENST00000471037 AASSQ9UDR5 926 aa7.81□□□□□ -1.16
SF3A1-206ENST00000471037 A0A0A6YYJ9 748 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 IGLV1-36A0A0B4J1U3 117 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 CCDC182A6NF36 153 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 EFCAB10A6NFE3 127 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 SLC16A7O60669 478 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 KHDRBS3O75525 346 aaKnown RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 UPK3AO75631 287 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 GLCEO94923 617 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 GYPBP06028 91 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 CLUP10909 449 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 PIPP12273 146 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 CBR1P16152 277 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 CTLA4P16410 223 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 NPR2P20594 1047 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 PCMT1P22061 227 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 CRHBPP24387 322 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 APEX1P27695 318 aaKnown RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 SRP14P37108 136 aaKnown RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 SLC15A1P46059 708 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 DVL1P1P54792 670 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 TUBA1BP68363 451 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 TUBA4AP68366 448 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 GLO1Q04760 184 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF91Q05481 1191 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 SMN1Q16637 294 aaKnown RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 KLHL22Q53GT1 634 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 C10orf128Q5T292 105 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 SLC25A47Q6Q0C1 308 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 VHLLQ6RSH7 139 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 TUBA1AQ71U36 451 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 BCDIN3DQ7Z5W3 292 aaKnown RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 MYPOPQ86VE0 399 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 WDFY1Q8IWB7 410 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 OR6V1Q8N148 313 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 GPR137CQ8N3F9 429 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 IPCEF1Q8WWN9 437 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 MCHR2Q969V1 340 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 RNFT2Q96EX2 444 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 TEAD3Q99594 435 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 ULBP2Q9BZM5 246 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 NUAK2Q9H093 628 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms