RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ABHD4Q8TB40 342 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 PHYHIPQ92561 330 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 RPL3LQ92901 407 aaKnown RBP13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TMEM203Q969S6 136 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 C4orf45Q96LM5 186 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 KCNJ15Q99712 375 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 ATF6BQ99941 703 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TMED9Q9BVK6 235 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 MOB1AQ9H8S9 216 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TXNL4BQ9NX01 149 aaKnown RBP13.25□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF281Q9Y2X9 895 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 RP1L1Q8IWN7 2480 aaPredicted RBP13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TMEM269A0A1B0GVZ9 245 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 OR6C6A6NF89 314 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 E9PLN8 166 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 LOC110117498-PIK3R3F6TDL0 507 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 SYNGR3O43761 229 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 SC5DO75845 299 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 GATBO75879 557 aaKnown RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 ZFPL1O95159 310 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 UBL3O95164 117 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 ATE1O95260 518 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PNPP00491 289 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 COX5BP10606 129 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF32P17041 273 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 NR4A1P22736 598 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 IGHV1-2P23083 117 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 HSD11B1P28845 292 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 OTX1P32242 354 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 CASP6P55212 293 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 FOXG1P55316 489 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PSMA6P60900 246 aaKnown RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 VBP1P61758 197 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PSG4Q00888 419 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 NFATC3Q12968 1075 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 TMEM53Q6P2H8 277 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 UNQ9370/PRO34162Q6UXP9 181 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 USP43Q70EL4 1123 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 GABRG1Q8N1C3 465 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PRSS35Q8N3Z0 413 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF433Q8N7K0 673 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 IL17RDQ8NFM7 739 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 KBTBD8Q8NFY9 601 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 OR1F12Q8NHA8 337 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 HSD17B8Q92506 261 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 THRSPQ92748 146 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 SPTSSAQ969W0 71 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 VKORC1Q9BQB6 163 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 CENPOQ9BU64 300 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 OR2H1Q9GZK4 316 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 COMMD4Q9H0A8 199 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PIGMQ9H3S5 423 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PLEK2Q9NYT0 353 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 PTTG2Q9NZH5 202 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF629Q9UEG4 869 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-203ENST00000470339 OR52A1Q9UKL2 312 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 SLC5A6Q9Y289 635 aa13.24□□□□□ -0.29
COL4A5-203ENST00000470339 GABRPO00591 440 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 ISG15P05161 165 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 KIR3DL2P43630 455 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 NCS1P62166 190 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 RPS11P62280 158 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL4A5-203ENST00000470339 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
COL4A5-203ENST00000470339 PMPCAQ10713 525 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 WDR38Q5JTN6 314 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF704Q6ZNC4 412 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-203ENST00000470339 TMEM91Q6ZNR0 172 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF610Q8N9Z0 462 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 NAXEQ8NCW5 288 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 NANOS1Q8WY41 292 aaKnown RBP13.23□□□□□ -0.29
COL4A5-203ENST00000470339 KCTD7Q96MP8 289 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 PDCD1LG2Q9BQ51 273 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 HDHD5Q9BXW7 423 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 WNT5BQ9H1J7 359 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 G6PC2Q9NQR9 355 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 GALNT8Q9NY28 637 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF224Q9NZL3 707 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 TINAGQ9UJW2 476 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 FBXL3Q9UKT7 428 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 ATRXP46100 2492 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 CACNA1BQ00975 2339 aa13.23□□□□□ -0.29
COL4A5-203ENST00000470339 CHD6Q8TD26 2715 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 A0A096LPE4 126 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 MSTNO14793 375 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 DOK2O60496 412 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 CRYGSP22914 178 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-203ENST00000470339 SPCS2Q15005 226 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 GABRA6Q16445 453 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 RSPO1Q2MKA7 263 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-203ENST00000470339 TBRG1Q3YBR2 411 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 ACSM3Q53FZ2 586 aa13.22□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms