RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 IFT88Q13099 833 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 NCF4Q15080 339 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 PGGHGQ32M88 737 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 KRT71Q3SY84 523 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CT45A1Q5HYN5 189 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 GCSAMLQ5JQS6 135 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 UBE2UQ5VVX9 321 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 ABHD12BQ7Z5M8 362 aaPredicted RBP2.73□□□□□ -1.97
VPS13A-209ENST00000467124 HORMAD1Q86X24 394 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 METTL13Q8N6R0 699 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 LINC01555Q8NAE3 123 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CHST4Q8NCG5 386 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 MDS2Q8NDY4 140 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 FBXO36Q8NEA4 188 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 OR51L1Q8NGJ5 315 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 OR5AR1Q8NGP9 310 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CT45A3Q8NHU0 189 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 BLOC1S5Q8TDH9 187 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 GIMAP1Q8WWP7 306 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 NAT6Q93015 286 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 TOP1MTQ969P6 601 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 RPEQ96AT9 228 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 RNF145Q96MT1 663 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CSPG4P5Q96PW8 444 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 IL22Q9GZX6 179 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 MCUBQ9NWR8 336 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 MEGF6O75095 1541 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 IGHV3-64DA0A0J9YX35 117 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 INS-IGF2F8WCM5 200 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CRYGCP07315 174 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CD3GP09693 182 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 TLX1NBP0CAT3 122 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 DNAH10OSP0CZ25 163 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CD37P11049 281 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ATF6P18850 670 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 RAB4AP20338 218 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 USF1P22415 310 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-209ENST00000467124 TNFSF9P41273 254 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CSNK1A1P48729 337 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CDKN2DP55273 166 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 RPS23P62266 143 aaKnown RBP2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CDH17Q12864 832 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 SLC39A6Q13433 755 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ART3Q13508 389 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF829Q3KNS6 432 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF658BQ4V348 819 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF530Q6P9A1 599 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ULK3Q6PHR2 472 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 H2AFVQ71UI9 128 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 DENND4AQ7Z401 1863 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 APRG1Q8IVJ8 170 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 RNF175Q8N4F7 328 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 FAM86B1Q8N7N1 296 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 DUSP18Q8NEJ0 188 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 NRBF2Q96F24 287 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CYYR1Q96J86 154 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 C9orf72Q96LT7 481 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 SCGB3A2Q96PL1 93 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 SIKE1Q9BRV8 207 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 CHID1Q9BWS9 393 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 SLC40A1Q9NP59 571 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ANAPC11Q9NYG5 84 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 KCNE3Q9Y6H6 103 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 WSB1Q9Y6I7 421 aa2.72□□□□□ -1.97
VPS13A-209ENST00000467124 ASTN1O14525 1302 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 NEURL4Q96JN8 1562 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 WI2-2373I1.2A0A1W2PRP0 233 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 NKX2-6A6NCS4 301 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 H0Y9J4 135 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 H7C0C1 242 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 TRDMT1O14717 391 aaKnown RBP2.71□□□□□ -1.98
VPS13A-209ENST00000467124 AQP8O94778 261 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 CATP04040 527 aaKnown RBP2.71□□□□□ -1.98
VPS13A-209ENST00000467124 BCHEP06276 602 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 HOXC4P09017 264 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PGA4P0DJD7 388 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PGA3P0DJD8 388 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PGA5P0DJD9 388 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 ERGP11308 486 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PSG2P11465 335 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 DRD3P35462 400 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 P2RX1P51575 399 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 NDUFA8P51970 172 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 VSX2P58304 361 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-209ENST00000467124 TAS2R46P59540 309 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PAFAH1B2P68402 229 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 ERCC8Q13216 396 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PON2Q15165 354 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
VPS13A-209ENST00000467124 MPPED2Q15777 294 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 NPSR1Q6W5P4 371 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 PRSS58Q8IYP2 241 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 NPWQ8N729 165 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 Q8N976 141 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 ZNF596Q8TC21 504 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 LKAAEAR1Q8TD35 194 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 BAALCQ8WXS3 180 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 RBMXL1Q96E39 390 aaKnown RBP2.71□□□□□ -1.98
VPS13A-209ENST00000467124 NOX3Q9HBY0 568 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms