RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SEMA3DO95025 777 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 CCNE2O96020 404 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 U2AF2P26368 475 aaKnown RBP eCLIP2.34□□□□□ -2.03
LRCH3-211ENST00000466054 ATP5OP48047 213 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 CXCL12P48061 93 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 C21orf59P57076 290 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 EIF3EP60228 445 aaKnown RBP2.34□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF816Q0VGE8 651 aaPredicted RBP2.34□□□□□ -2.03
LRCH3-211ENST00000466054 IFT88Q13099 833 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 SELENBP1Q13228 472 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 KIR2DS1Q14954 304 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 TRAM2Q15035 370 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 PSMD5Q16401 504 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 HSDL1Q3SXM5 330 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 TCEAL5Q5H9L2 206 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 SPANXN2Q5MJ10 180 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 SNX20Q7Z614 316 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 COX18Q8N8Q8 333 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 ZFP41Q8N8Y5 198 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 GATSQ8NAP1 163 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 LILRB4Q8NHJ6 448 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 TCEAL3Q969E4 200 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 PTX4Q96A99 478 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 CTRCQ99895 268 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 RNF5Q99942 180 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 ANKRD60Q9BZ19 345 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 FAM192AQ9GZU8 254 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 TMEM185BQ9H7F4 350 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 SLC17A4Q9Y2C5 497 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 NINLQ9Y2I6 1382 aa2.34□□□□□ -2.04
LRCH3-211ENST00000466054 AHDC1Q5TGY3 1603 aaPredicted RBP2.33□□□□□ -2.04
LRCH3-211ENST00000466054 IGLV3-12A0A075B6K2 115 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 CTAGE15A4D2H0 777 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 RDH16O75452 317 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 FOXH1O75593 365 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 REM1O75628 298 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 CCNKO75909 580 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 FGFR1OPO95684 399 aaKnown RBP2.33□□□□□ -2.04
LRCH3-211ENST00000466054 IGLV3-19P01714 112 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 CD74P04233 296 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 CCNA1P78396 465 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 LIPEQ05469 1076 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 TGM3Q08188 693 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 RCAN2Q14206 197 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 HSP90AB3PQ58FF7 597 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 XKR4Q5GH76 650 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 AP1ARQ63HQ0 302 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 SLC25A34Q6PIV7 304 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 SLC16A13Q7RTY0 426 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 CTAGE6Q86UF2 777 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 BBS5Q8N3I7 341 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 OR10AD1Q8NGE0 317 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 OR52E2Q8NGJ4 325 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 OR5K2Q8NHB8 316 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 LYPD6BQ8NI32 183 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 LINC01560Q8TB33 94 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 NUBPLQ8TB37 319 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 FAM81AQ8TBF8 368 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF721Q8TF20 911 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 C8orf44Q96CB5 159 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 RBMXL1Q96E39 390 aaKnown RBP2.33□□□□□ -2.04
LRCH3-211ENST00000466054 HSD17B10Q99714 261 aaKnown RBP2.33□□□□□ -2.04
LRCH3-211ENST00000466054 OR52D1Q9H346 318 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 C1orf198Q9H425 327 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 LYARQ9NX58 379 aaKnown RBP2.33□□□□□ -2.04
LRCH3-211ENST00000466054 RABL2BQ9UNT1 228 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 COL1A2P08123 1366 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 PALLDQ8WX93 1383 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 TNS2Q63HR2 1409 aa2.33□□□□□ -2.04
LRCH3-211ENST00000466054 A6NDN8 102 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 TRIM64CA6NLI5 447 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 OR2AG2A6NM03 316 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF850A8MQ14 1090 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 L7N2F9 121 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 EIF4EP06730 217 aaKnown RBP2.32□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF688P0C7X2 276 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 GTF2E2P29084 291 aaKnown RBP2.32□□□□□ -2.04
LRCH3-211ENST00000466054 SLC11A1P49279 550 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 RPS15P62841 145 aaKnown RBP2.32□□□□□ -2.04
LRCH3-211ENST00000466054 SEMG2Q02383 582 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 CDC20Q12834 499 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 KRTAP13-2Q52LG2 175 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 SAXO2Q658L1 398 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 SPESP1Q6UW49 350 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 MBOAT2Q6ZWT7 520 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 WDFY1Q8IWB7 410 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 OR6N1Q8NGY5 312 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 LRRC29Q8WV35 223 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 TSEN15Q8WW01 171 aaKnown RBP2.32□□□□□ -2.04
LRCH3-211ENST00000466054 C17orf50Q8WW18 174 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 APH1BQ8WW43 257 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 ECHDC3Q96DC8 303 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 NEURL3Q96EH8 262 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 XPO6Q96QU8 1125 aaKnown RBP2.32□□□□□ -2.04
LRCH3-211ENST00000466054 RTBDNQ9BSG5 229 aaPredicted RBP2.32□□□□□ -2.04
LRCH3-211ENST00000466054 ING2Q9H160 280 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 RAB20Q9NX57 234 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 S4R3C0 116 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 BRWD3Q6RI45 1802 aa2.32□□□□□ -2.04
LRCH3-211ENST00000466054 A0A075B6Q4 140 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms